Gene Acid345_0752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0752 
Symbol 
ID4068628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp928395 
End bp929057 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID637982758 
Producthemolysin III family channel protein 
Protein accessionYP_589831 
Protein GI94967783 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.67077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACACA TTGAGATAGA ACCCTTCAAG CTAGGCGAGG CCATCGCCAA CAGCGTCACG 
CACGGCATCG GCGCTCTCCT CAGCGTTCTC GGCTTAATCA CTCTTATCGT TTTTGCGGCG
GTTGGTGGGA ACACGCGTCT GCTGGTCAGT GTCACGATCT ATGGTGCTAC GCTCTGCGCG
TTGTATCTCA TCTCCACGCT TTACCACGCC ATCCCTGCTC CTAGTGCGCG CCGCGTCTTC
CGCTTTCTCG ACCACGCTTC GATTTATTTG CTGATTGCAG GTACGTACAC GCCGTTCACG
CTGGCGCTTC TGCGCGGTGG GTGGGGCTGG ACGCTCTTCG CGCTGGTCTG GGCGATCGCG
ATTCTTGGCG TGGTCTATAA GATTTTCGCC ACTGGGCGGC ACGAGATCTT TTCGTCCGCG
CTCTACATCG GCATGGGCTG GATCGTGGTC ATCGCCATCA AGCCGCTGCT CGCGGTGCTG
CCGATGCCAG GGTTTCTATG GATGATGGCG GGCGGCATCT TCTACACCGG CGGAATTGTT
TTCTATCTGA AAGATCGGCG ACCGTACTTC CACATGCTGT GGCACCTGTG CGTGCTGGCG
GGAAGTGTCT GTCATTTTGT GGCGATTTTG CGGTATGTGG TCGGGCCAGC GACTGCGGCC
TGA
 
Protein sequence
MRHIEIEPFK LGEAIANSVT HGIGALLSVL GLITLIVFAA VGGNTRLLVS VTIYGATLCA 
LYLISTLYHA IPAPSARRVF RFLDHASIYL LIAGTYTPFT LALLRGGWGW TLFALVWAIA
ILGVVYKIFA TGRHEIFSSA LYIGMGWIVV IAIKPLLAVL PMPGFLWMMA GGIFYTGGIV
FYLKDRRPYF HMLWHLCVLA GSVCHFVAIL RYVVGPATAA