Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0752 |
Symbol | |
ID | 4068628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 928395 |
End bp | 929057 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637982758 |
Product | hemolysin III family channel protein |
Protein accession | YP_589831 |
Protein GI | 94967783 |
COG category | [R] General function prediction only |
COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.67077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGACACA TTGAGATAGA ACCCTTCAAG CTAGGCGAGG CCATCGCCAA CAGCGTCACG CACGGCATCG GCGCTCTCCT CAGCGTTCTC GGCTTAATCA CTCTTATCGT TTTTGCGGCG GTTGGTGGGA ACACGCGTCT GCTGGTCAGT GTCACGATCT ATGGTGCTAC GCTCTGCGCG TTGTATCTCA TCTCCACGCT TTACCACGCC ATCCCTGCTC CTAGTGCGCG CCGCGTCTTC CGCTTTCTCG ACCACGCTTC GATTTATTTG CTGATTGCAG GTACGTACAC GCCGTTCACG CTGGCGCTTC TGCGCGGTGG GTGGGGCTGG ACGCTCTTCG CGCTGGTCTG GGCGATCGCG ATTCTTGGCG TGGTCTATAA GATTTTCGCC ACTGGGCGGC ACGAGATCTT TTCGTCCGCG CTCTACATCG GCATGGGCTG GATCGTGGTC ATCGCCATCA AGCCGCTGCT CGCGGTGCTG CCGATGCCAG GGTTTCTATG GATGATGGCG GGCGGCATCT TCTACACCGG CGGAATTGTT TTCTATCTGA AAGATCGGCG ACCGTACTTC CACATGCTGT GGCACCTGTG CGTGCTGGCG GGAAGTGTCT GTCATTTTGT GGCGATTTTG CGGTATGTGG TCGGGCCAGC GACTGCGGCC TGA
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Protein sequence | MRHIEIEPFK LGEAIANSVT HGIGALLSVL GLITLIVFAA VGGNTRLLVS VTIYGATLCA LYLISTLYHA IPAPSARRVF RFLDHASIYL LIAGTYTPFT LALLRGGWGW TLFALVWAIA ILGVVYKIFA TGRHEIFSSA LYIGMGWIVV IAIKPLLAVL PMPGFLWMMA GGIFYTGGIV FYLKDRRPYF HMLWHLCVLA GSVCHFVAIL RYVVGPATAA
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