| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0704 |
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| Symbol | |
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| ID | 4071349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 865132 |
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| End bp | 866283 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637982710 |
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| Product | twitching motility protein |
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| Protein accession | YP_589783 |
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| Protein GI | 94967735 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTG ATGACCTGCT TCGTATTGCG ATGGAGCGAA AGGCTTCCGA CTTACACCTC
AAGGTCGGCA ACTATCCGCA CATCCGCATC GATGGCGAGC TGGTCCCCCT CACCGATCAA
CCGCGTATCT CCGCCGAAGA CATGCTGAAT ATGGCGTTCA GCATGATGTC GAACCGGCAG
AAGCAAAAGT TCAAGGAGAA CGCCGAACTC GATATGGCCT ACGGTGTGGC CGGCCTCGGA
CGCTTCCGTG TGAACGTCTT CCAGCAGCGC GGCAATGTCG GCGTGGTACT GCGCGTGATT
CCGACGAAGA TCCGCAGCCT CGACGAGCTT TACCTGCCTC GCATTATCGA AGGAATTTGC
GACGAGCAGC GTGGATTGGT GCTGGTAACG GGCGTCACTG GTTCCGGTAA GTCGACGACC
CTGGCCGCCA TGATCGACCG AATCAACTCG ACGCGGCCGG AACACATCAT CACGATTGAG
GACCCGATCG AATTTCTGCA TCGCGATAAG AAGGGGTTCG TCAACCAGCG CGAAGTGGAA
GTGGATACGC CGAGTTTCGC GTCGGCGCTG CGCGCCAGCT TGCGTCAGGA TCCTGACGTG
ATTCTCGTCG GCGAAATGCG CGACCTGGAA ACGATCCAGA CTGCACTGCA CGCGGCTGAA
ACCGGTCACA TGGTGTTCAG CACGTTGCAT ACGCTAGACG CGGTGGAAAC CATTAACCGT
ATTATTTCGG TCTTCCCGCC GCCGGAACAG AAACAGATTC GTTTGCAATT AGCGGCGACG
ATGCGCGCGA TCATCAGCCA ACGCCTGATG CGCCGCGCCG ATGGTGCGGG CCGAGTGCCT
GCGGCCGAAG TGCTTATCTC TACGGCTTAT ATCCGCGAAG CGATCATCGT TCCGGAAAAG
ACACGCAGCA TCCGCGAAGC ACTGGCGGCC GGCACTTCGC AGTACGGCAT GCAGACCTTC
GACCAGTCGC TCTACGACCT CTACACACAG GGCCTGATCA CCTACGACAC CGCGCTCGAA
AACGCGTCGA ACCCCGACGA CTTCAAGCTG CGGGTTCAGG GTATTTCGGG TACGGCAGAA
GCCGCTCGAG AAGAGATGCA GCAGCACGGA TTCACCACCG GATTCGGCGG CGGGCAGGGC
CCGGGACGAT AA
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| Protein sequence | MHIDDLLRIA MERKASDLHL KVGNYPHIRI DGELVPLTDQ PRISAEDMLN MAFSMMSNRQ
KQKFKENAEL DMAYGVAGLG RFRVNVFQQR GNVGVVLRVI PTKIRSLDEL YLPRIIEGIC
DEQRGLVLVT GVTGSGKSTT LAAMIDRINS TRPEHIITIE DPIEFLHRDK KGFVNQREVE
VDTPSFASAL RASLRQDPDV ILVGEMRDLE TIQTALHAAE TGHMVFSTLH TLDAVETINR
IISVFPPPEQ KQIRLQLAAT MRAIISQRLM RRADGAGRVP AAEVLISTAY IREAIIVPEK
TRSIREALAA GTSQYGMQTF DQSLYDLYTQ GLITYDTALE NASNPDDFKL RVQGISGTAE
AAREEMQQHG FTTGFGGGQG PGR
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