| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0691 |
|---|
| Symbol | |
|---|
| ID | 4071336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 849651 |
|---|
| End bp | 852590 |
|---|
| Gene Length | 2940 bp |
|---|
| Protein Length | 979 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637982697 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_589770 |
|---|
| Protein GI | 94967722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCATC GTCTCTTGCG TACCGCGCTC GTCTGCGTTT CGTTCGTCTC GATTTTCGGA
GTTCTCACCT CTGCCCAGGA ATTTCGCGGC GGACTAGCTG GTAGGGTCCA GGACGCCTCT
GGCGCCCGCG TCGCCGCAGC CCACGTCCAG GTGCAGGCTC CAGAGTCTTC CGTGCAACGC
GAGACCGCCA CAGACGCAAG CGGCAACTTC CGCTTCAGCG ATCTTCCCGT CGGACGCTAC
CAGGTGACCG TCAACGCGCA GGGTTTCGGT GTCGCGACCT CCGAAGTCGC GGTGCTGGTC
GGCTCAACCC GCGATGTCTT CGTGACCCTC CATCCGCCTT CGGTGAAGGA GAGTGTCGCG
GTCTCCGGTG AAGCATCCTC CATCACCATG CAGCCCCTCG ATACCTCAAG CCCCGTCCAC
CAGGCGGTGG TCTCGGCACA TGATCTCGAG GAACTCCCGC TCGCCAACCG CAGCTTCGCC
AACATGGCGT ATCTCGCACC CGGCACCCAG CCCATCGAAC CCAGCGACCC GACCAAGGCA
CGCATCACCG CCGTCGGCAC CGGTGGCAGT TCCGGGTTGA ATAACGAGAA CTCCGTGGAC
GGAGGCGACA ACTCCGACGA TTACATCGGC GGCTTCCTCC AGAACTTCTC CACCGACAGC
ATCCAGCAGT TCGCCTTCCG CGTCGCGCAG GAAGACGCCG ACACTGGCCG CACGACCGGC
GGCTCCGTCG TCATTACAAC CAAGCGCGGC ACCAACGACT GGCACGGCCT ATTCGGCTTC
TACGACCGCA CCTCTGGCCT CACCGCTCGC TACCCCATCG ACAATCCTGA GCCCAACCCG
AAGCAGCCTT TCTCGCGCCA GAACTACATC TTCAACGGCG GCGGGCCGAT TAAGAAAGAC
AAGCTCTGGG GTTTCGGATC GTTGGAATAC GTCCACGAGC GCGCCAGCAT CGCGTACAGC
AACGACAGCC TCGCACAGTT CAACGCGCTG GCCTCGCTCG CGCAGGCCGG CTATATTCCC
GGCGCTCCCG ATATCGCCGT TCCGCCCTAT GTCATCACTC CCTTTAACGA CTACATCGGC
GATGCCCGTC TCGATTGGGC GCAATCCGAT CATTCGCAGT GGTTCTTGCG CGGCGCCACC
GACCGTTACA CCACCGAGAA CGACATGGTG CAGCAGGGCA CGCTCCCGTC GGTCGGCGCC
ACGACGCGTT CGCTCTACTG GAATTTCGCG CTTAACAACC AGTACCAGTT CTCGAACACC
TGGCTCGGTT CCTTCACTTT CGACGCTTCC ATCCTGCATC GCACCGTCAA TCGCAACCAG
TACTACGGCT TCTCGCTCGA CTTCCCATTC ACCACCACGC CCAGCGTCAT CACCGGCGCC
GACACCTTCG GCGACAACTC CTTCGTAACG CCGATCACTG CCTTCCCAGT CCTGCGTAAC
CAGCAGAAGT ATCAGTTCCG CTACGATCTT TCCCACTCGA CGCCGAAGCA CACCATGAAG
TTCGGTGTGA ACTTGATCCA CGAGCCGGTC ATTGGGGGAG TATTGGCCTC ACAAGCCGAA
ACCGTCATCG CTTACTCGCA GAATCCCGTG GACTACGCGG CCAACCCTGC CAGTTTCGCG
TTTACGTCGG CGTATCTCAC CAATCCTGAT ACCTGCAACG AAAACGCTCT CGATCCCGAC
ACGGTTTGTA CCGCGACGCC TGCGGGCGAT GGGAGTTTTT GGCAGAACGT GCAGCGCCTG
GGCATCTACG CCGAGGACAT CTGGCGCGTG ACCCCGCACC TCACGCTGAA CTACGGCCTG
CGTTGGGACA CAACCTTCGG CCTCTTCGAC GTGGGTGGCC GCAGCCAGAA CGCGAACGTC
GCCCTGCAAA CCATTGCCTA CCCGCAGTAC AACGGCGTCC CGCTCGACAA CCGCAAGCAG
TTTGGTCCGC GCGTCGGCGC CATTTATTCA CCGGGAGATA GCGGCAAACT CGTTCTTCGC
GCTGGCTTTG GCATGTTCTA CAACGATCTC GCGCAAAACG GCTGGGTGGA TGCGTTGATG
GCCGTTAACC CCGGCAATGC CAACGTCAAC AGCACCGGCG CGATCATCGA CCCGCACTAC
CACACGCCCT ACGCCATCGA CGCTAGCGCC GGCGTGGAAT ACGCCTTCGA TCAAGACTGG
ATGGGTGCCG TCGAATTCAC GCACCAGACC GGCATGCACG GCTATCGTCG CTACGACTAT
CCCGATGTCT CAGTCTTCCG CAGCGACAAT CGCTCCGCCT ACGACGGCCT CGTCCTGCGC
GTACAGGGCA ACGTCTCCAA GCACTACAGC CTGACTGCCC ACTACACCTT TGCCAAGGCC
CAGACCTGGG GCTGCCAACT CGGCGAACTC TTTGACTACG TGAACGGCGT CTGCGACCCC
TTTAACGCCT TTGGCCCGGG GGACTACGGT CCAGCCGGTG AAGACGTACG CCACCGCTTC
GTGCTCGCAG GCACATGGCA CGCCCCGCTC GGCATCGAGC TTTCCACCAT GACGCAAGCC
GAGAGCGGTC GCCCCTTTAC CATTACGAAT CCCGACGGCT CCGGCCGCGC CGTCATTAAC
GGCGTCACCA CTACCATGGA CCAGTTCCGC GGACGCCCAT ACTTCCAGGT GGACCTCCGC
GTCTCCCGTC CGTTCCACAT CCAGGAACGC TGGCAAGTCA CCCCGTTCTT CGAGATGTTT
AACCTCTTCA ACCGCAACAA TCCCGGCGCG TTCTACCGCG CCAACATGGC GGATTTGCCG
GTCAACGATC CTGACAATGC CACAGCCATC TGTTTGAACG CTGATTGCAG CCAGACCAAA
CCCATCACCA GCCCGAACCA ACTCCGCATT CCAGCCGGCG CTTTCGGCGA CTTCTTCGGC
CCCGGTACTA CCGTCGGCAT TCCATTCAGC GGGCAATTCG GTGTTAGAGT GAGCTTCTGA
|
|---|
| Protein sequence | MTHRLLRTAL VCVSFVSIFG VLTSAQEFRG GLAGRVQDAS GARVAAAHVQ VQAPESSVQR
ETATDASGNF RFSDLPVGRY QVTVNAQGFG VATSEVAVLV GSTRDVFVTL HPPSVKESVA
VSGEASSITM QPLDTSSPVH QAVVSAHDLE ELPLANRSFA NMAYLAPGTQ PIEPSDPTKA
RITAVGTGGS SGLNNENSVD GGDNSDDYIG GFLQNFSTDS IQQFAFRVAQ EDADTGRTTG
GSVVITTKRG TNDWHGLFGF YDRTSGLTAR YPIDNPEPNP KQPFSRQNYI FNGGGPIKKD
KLWGFGSLEY VHERASIAYS NDSLAQFNAL ASLAQAGYIP GAPDIAVPPY VITPFNDYIG
DARLDWAQSD HSQWFLRGAT DRYTTENDMV QQGTLPSVGA TTRSLYWNFA LNNQYQFSNT
WLGSFTFDAS ILHRTVNRNQ YYGFSLDFPF TTTPSVITGA DTFGDNSFVT PITAFPVLRN
QQKYQFRYDL SHSTPKHTMK FGVNLIHEPV IGGVLASQAE TVIAYSQNPV DYAANPASFA
FTSAYLTNPD TCNENALDPD TVCTATPAGD GSFWQNVQRL GIYAEDIWRV TPHLTLNYGL
RWDTTFGLFD VGGRSQNANV ALQTIAYPQY NGVPLDNRKQ FGPRVGAIYS PGDSGKLVLR
AGFGMFYNDL AQNGWVDALM AVNPGNANVN STGAIIDPHY HTPYAIDASA GVEYAFDQDW
MGAVEFTHQT GMHGYRRYDY PDVSVFRSDN RSAYDGLVLR VQGNVSKHYS LTAHYTFAKA
QTWGCQLGEL FDYVNGVCDP FNAFGPGDYG PAGEDVRHRF VLAGTWHAPL GIELSTMTQA
ESGRPFTITN PDGSGRAVIN GVTTTMDQFR GRPYFQVDLR VSRPFHIQER WQVTPFFEMF
NLFNRNNPGA FYRANMADLP VNDPDNATAI CLNADCSQTK PITSPNQLRI PAGAFGDFFG
PGTTVGIPFS GQFGVRVSF
|
|---|
| |