| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0619 |
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| Symbol | |
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| ID | 4070114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 756569 |
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| End bp | 759001 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637982624 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589698 |
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| Protein GI | 94967650 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATG TTCGCTTCGC CATCCGCCAG TTGCTGCGCA ACAAAGCCTT CGCCATCACG
GTGGTCTTCA CGCTCGCGCT CTCGATCGGC GCCAATACCG CGATCTTCTC GGTCGTCAAC
GCGCTGCTCA TCCGCCCGCT GCCGTACCCG CAGCCGGAGC GGCTGGGAAC CATCTTCGGC
CGCGTATCCG GCCCGGGCAA CGCCGAGGAC GAACGCTCCG GTGTGGACGG CGAAAAGTGG
GAGCTCCTGC GCGACAACGT TCCCGCCGTG CTTGCGGCGG TGCAGAGCGA ATTCGCGGCA
GGGGCCAATC TCAAGGCCGG ATCGGCGGTG CAATATGTCC ACGCCGGCCG CGTCTCCGCG
CACTATTTCG AAGTGCTGGG CACCACGCCA CGCCTGGGCC GCACCTTTAC CGAAGACGAG
GATCGCGATG GCGGACCCCA GGCTGCGATC CTCAGCGACG GTCTTTGGCG CAGTGCGTTC
GGCGCCGATC CCCGCGTCAT CGGCACCAAC ATCCTCCTCA AGGGCGAACC GTCCACGATC
GTCGGGGTAA TGCCGCCGCA CTTCGCCATG CCCCAGTCGG CGGACATCTT CACGCCAATC
CGTGCCTCGC GCCATGGCGA GGGCACCGGC ACCAACTTCA CCGCGATCGT GCGCCTTCGT
CCAGGCGCCA CCTGGCAGCA AGCCGACACG CAAATCAATG CTGCATGGGC TGATCGTATC
AACCGCTTCG AGAAGCACAA TCCCGGCTCG CACGTCTCGT ACTACAGCGT GCCGCTACAA
CAAGGCCAAA GCGCCGATCT CCGCGGACCG GTCGTAGCGC TAATGGGCGC CGTGGCTTTC
ATCCTGATGA TCGCCTGCGC GAACCTTGCC GGGCTGATGC TCGTCCGCGT CGCGCGCCGC
ACACCTGAGT TCGCCACCCG TCTCGCACTC GGCGCGTCGC GGTGGGACAT CCTGCGCCAG
CTTTGGACCG AAGGCCTGGT GCTTGCCGTC GCCGGTGGCG GCGCGGGCGT TGTGCTGGCG
TTCGGCGCTC TCCGCGCGTT GACCACGCTG CTTCCGCCAG ACCTGCTGCC GGTGCAGAAC
ATCGCGCTCG ATGGCCGCGT GCTGCTCTTT ACCGCGCTTG CCACCATCGC CACCAGCGTG
CTCTTCGGGC TGCTGCCCGC GCTGCAAACG CGACGCCTCG ATCTTCGCGC CGCCATCGCC
GCCGGATCCA GCCGCAGCGT CTCTGCCGGC GGACACACCC GCGTTCGTCA GGCATTGATC
GCCGGCGAAA TCGCACTCAC GGTCGTGTTG CTCGCCGCTT CCGGCCTGCT CGTGCGTACC
CTTGTCTATC TCGAAACGCT GCCGTCCGGC TTCGACGCAA ACAACGTGAT GGCCGCGCGT
CTCTCCCTCG ATGACGCGCG CTATCACGAT CCTGCAAAGT TTCGAGATCT ATTAAGCAAG
AGCCTGGCAT CGATGCGACA GATTCCCGGC GCCGAATCCG CCTCCGTCGG CCTAAGCCTG
CCCTACGAGC GCGGTCTGAA TGACGGCATC AAGATCGCCG ACGGCAAAGA AGCCGGCCAG
CAACCGACGG CCACCGTCAT CTACGTCACC CCGCAATATT TCGAGACTTT GCGCATTCCC
GTGCTCGCGG GCCGCACCTT TACCGAAGCC GACACCGCCG ACAGCCAGCC CGTCGTCATC
GTGAACCAGT CCTTCGCGCG TCGGTATCTC AACCAGCCCG ACGCCACCGG CCGCCAGCTC
GGCGCCGATA AACCACGCAT CGTCGTCGCG GTCGTAGCCG ATGTCGCCAA AGCTCCCGGC
TTCGATTCCG ATCAGCCTCT GAATGTCGAG CCGACGGTAT ACGTTCCCGC TACCCAGGTG
CCGGGCGTAC TGATCGCCGT CGCTCACATC TGGTTCCAGC CCAGTTGGAT CGTCCGCACC
AGCGGCCCCG TGACCGGCCT TACCGAGCAG ATGCAGCACG CGCTGGCCTC CGCCGATCCT
TCGCTGCCCT TCTCCGGTTT CTATCGCATG ACTGACATCC GCGCAGAAGC CGTCACTATG
CAGCGCGTGG AAGTCACGCT GCTCACTACT CTGGCAGCGC TCGCGCTCTT GCTCTCGGCG
ATCGGAATCT TCGCTCTCGT CTCGAACCTC GTGCTGCAGC GCACGCGCGA AATCGGCATT
CGCATCGCGC TCGGCTCCAC CATCCACCAG GCCATGCTCG AGATCGGCCG CTCCGGACTC
ATCTCCGCAG CGTGCGGACT CGCCGCCGGC CTCGTTCTCT CCGCTTTCGC GTTGCGCATT
ACCAAGAGCG CTCTCTACGG CGTGCGCATC TACGATCCGG TGACGTTGTT CGGCGTGCTG
GGAATCCTCG CGATCATCGC GCTCGGCGCG ACGTATCTTC CGACGCTGCG TATCGCGCGC
ATTCATCCGG CGGAAACATT GCGCGCCGAA TAG
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| Protein sequence | MPDVRFAIRQ LLRNKAFAIT VVFTLALSIG ANTAIFSVVN ALLIRPLPYP QPERLGTIFG
RVSGPGNAED ERSGVDGEKW ELLRDNVPAV LAAVQSEFAA GANLKAGSAV QYVHAGRVSA
HYFEVLGTTP RLGRTFTEDE DRDGGPQAAI LSDGLWRSAF GADPRVIGTN ILLKGEPSTI
VGVMPPHFAM PQSADIFTPI RASRHGEGTG TNFTAIVRLR PGATWQQADT QINAAWADRI
NRFEKHNPGS HVSYYSVPLQ QGQSADLRGP VVALMGAVAF ILMIACANLA GLMLVRVARR
TPEFATRLAL GASRWDILRQ LWTEGLVLAV AGGGAGVVLA FGALRALTTL LPPDLLPVQN
IALDGRVLLF TALATIATSV LFGLLPALQT RRLDLRAAIA AGSSRSVSAG GHTRVRQALI
AGEIALTVVL LAASGLLVRT LVYLETLPSG FDANNVMAAR LSLDDARYHD PAKFRDLLSK
SLASMRQIPG AESASVGLSL PYERGLNDGI KIADGKEAGQ QPTATVIYVT PQYFETLRIP
VLAGRTFTEA DTADSQPVVI VNQSFARRYL NQPDATGRQL GADKPRIVVA VVADVAKAPG
FDSDQPLNVE PTVYVPATQV PGVLIAVAHI WFQPSWIVRT SGPVTGLTEQ MQHALASADP
SLPFSGFYRM TDIRAEAVTM QRVEVTLLTT LAALALLLSA IGIFALVSNL VLQRTREIGI
RIALGSTIHQ AMLEIGRSGL ISAACGLAAG LVLSAFALRI TKSALYGVRI YDPVTLFGVL
GILAIIALGA TYLPTLRIAR IHPAETLRAE
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