| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0618 |
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| Symbol | |
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| ID | 4070113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 753903 |
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| End bp | 756371 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637982623 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589697 |
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| Protein GI | 94967649 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACGC TGTTGCAGGA TCTCCGCTTT GCGTCGCGGC AATTGCGCAA GAACCCTGGT
TTCGCCATCA CCACCATCCT CACGCTTGCG CTCGGCATTG GTGCCGCCAC GGCGATCTTC
AGCCTGGTAA ACGCCGTGCT TCTGCGGCCG CTGCCGTTCC CCGAGCAGGA CAAAATTGTG
TGGACGGCGA TGGCGCACAC GCCGCGCAAC GCCAAGACTG CCGATGCCGC TCTCGTGCCC
GGCTCCATGA GCTATCCCGA CTACTTCGAC CTGCGCAAGG GCAATAAGAC GCTCCAGTAC
CTGTCCTCTT ATCACGACAG CAGCTTCTCC GTCACCGGCC GTGGTGATGC CCGCCATGTG
GACGGATTCA CGGTGAGCGC CGACTTCTTC CGCACTCTCG GTGTGCATCC CGAACGCGGC
CGCGATTTCC TCGCCGACGA TGAAAAACCC GGTGTGCACG TCGCCATGCT TGGCCACTCG
CTGTGGCAGA GCACCTTCGG ATCGGATCCC GACATCATTG GCAAGAACAT CACGATCGGT
GGACTTTCCT ATACCGTCGC CGGCGTGATG CCCGCGGACT TCAACTTCCC CGTGCAGAAT
CCTGCCGCGC AGCTCTGGAC GACCCTCGCC GATGATGCCC TCGATTCCAC CGGCGACCAC
CCGGTTACCG TGCAGCGTGG CGCACACTTT CTTTCGATGG TCGGAAGGCT GAAGCCCGGC
GTCTCCACCG AGCAGGCACA GGCTGATCTC ACGGTGATCG TGAAGAACCT CGCGGCGCAA
TATCCCGACA CCAATTCCCA TTTCCTCGGC GCCTTCGTAA AGCCGCAGCT CGAACAAATG
ATCGGCGATA CGCGCGGGCC ATTGCGAATG CTCTTCGCCG CCGTGATCTT CGTATTGCTC
ATCGCCTGCG CCAACGTTGC GGGCTTACTG CTCGCCCGTG CTTCGCGCCG ACGCTCTGAA
ATAGCAGTGC GCTCGGCACT TGGCGCCACA CGGATGCAGA TCGTGCGCCA GGTCATGGTG
GAATCAGTCT TCATCGGTAT CTGCGGCGGC ATCGCCGGAC TCCTTCTCTC CATGGCGTTA
CTCCGCCTGC TGCTGCGCTT CGTGCCCTCC GATATTCCAC GCCTCGATTC GGTCGGCACC
GACTATCGCG TTTTCGCATT TGCGATCGTG ATCTCGGTGA TCACGGGCGT ACTCTTCGGG
GTGCTTCCCG CGATGCGTAT CTCGCGTCTC GATCCTTCAG CCTCACTGCG CGACGGTACC
CGCACTTCGA GCGCCGGGCG CCAGCAGCAT CATCTGCACG GAGCACTCGT CATCGCGGAA
ACCGCGATCG GTCTGGTGCT GCTCGTCGGT TCAGGCCTGC TCATTCGCAG TTTTGTGCGG
GTGATGCATG TCGATCCCGG CTTCGATGCA CGCCATGTGT TGCTCGCCAG CGTGGACCTT
CCCGACAATC GCTACCCGGG GGATAAAAAC GTAAGTTTTT TTCAGCAGTT GATCCCGCGG
CTGCAAGCCT TGCCCGGGGT CCAGTCAGTT GCAGCAGGGT GGCCGCTCCC GTTGACCGGA
AGCATGATGA GCATATCGTT CGAGATCGAA GGTCATCCTG TCCCCAAAGC CGACGAGCCG
TCCGAGATCG TCAGCATCGC AACGCCCGGC TTCTTCAAAA CAATCGGTAT CCCAGTTAAG
CGCGGACGCG AGTTCCTCGA GACCGACACG CGCACGTCGA CCAAAGTCAT CATCCTCACC
GAGAGCTTCG CCAAGAAGTA TTTTCCCAAC GAAGACCCAA TCGGCAAGCA TGTGAAGCCC
GGGCTCGGCG ATGGTTACAC CGACAGCGTG TGGCGTGAAG TTGTCGGCGT GGTCGGCGAC
ATCAAGCGCC AGGGCCTCAC CGTCGAAACT CGACCCGAGT ACTACCTGCC GCATACGCAG
GCCATCGTGG GCCCGCCGAT CTTCGTCATC CGAACCTCCG GCGATCCCAC GCAGATTACC
AATGCCGTGC GCTCCGAAGT CGCGGCCATG GACCGCAACG TGCCCGTCTA CGACGTGCAT
ACTTACGACG ACCTTATTTC GAAGAATGCC TCGCAGCCGC GCTTCCAGTC CATGTTGCTG
ACCTGCTTCG CCGCGCTCGC GCTCCTGCTC TCCGCCATCG GTCTTTACGC CGTGCTCAGC
TACATGGTGG CGCAACGCAC ACTTGAGATC GGTGTCCGCA TGGCGCTCGG TGCGCGTCGC
CGTGATGTAG TGAACCTCAT TTTGAAACAC GGCTTGGGCT TAGCACTGGT AGGACTTGTG
CTCGGCATGG GACTCTCGCT GGTGTTGACG CGCTACTTGA GCAGCATGCT CTACACCATC
AAGCCGCTCG ATCCGGTCAC GCTCCTCACT GTCACAGGAA TTTTGCTTGT GGTCGCCGTC
GTTGCCAGCA CCGCGCCCGC GTGGCGCGCC GCTCGCCTCG ACCCGATGAA GACCTTGCGC
GACCAATAG
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| Protein sequence | MHTLLQDLRF ASRQLRKNPG FAITTILTLA LGIGAATAIF SLVNAVLLRP LPFPEQDKIV
WTAMAHTPRN AKTADAALVP GSMSYPDYFD LRKGNKTLQY LSSYHDSSFS VTGRGDARHV
DGFTVSADFF RTLGVHPERG RDFLADDEKP GVHVAMLGHS LWQSTFGSDP DIIGKNITIG
GLSYTVAGVM PADFNFPVQN PAAQLWTTLA DDALDSTGDH PVTVQRGAHF LSMVGRLKPG
VSTEQAQADL TVIVKNLAAQ YPDTNSHFLG AFVKPQLEQM IGDTRGPLRM LFAAVIFVLL
IACANVAGLL LARASRRRSE IAVRSALGAT RMQIVRQVMV ESVFIGICGG IAGLLLSMAL
LRLLLRFVPS DIPRLDSVGT DYRVFAFAIV ISVITGVLFG VLPAMRISRL DPSASLRDGT
RTSSAGRQQH HLHGALVIAE TAIGLVLLVG SGLLIRSFVR VMHVDPGFDA RHVLLASVDL
PDNRYPGDKN VSFFQQLIPR LQALPGVQSV AAGWPLPLTG SMMSISFEIE GHPVPKADEP
SEIVSIATPG FFKTIGIPVK RGREFLETDT RTSTKVIILT ESFAKKYFPN EDPIGKHVKP
GLGDGYTDSV WREVVGVVGD IKRQGLTVET RPEYYLPHTQ AIVGPPIFVI RTSGDPTQIT
NAVRSEVAAM DRNVPVYDVH TYDDLISKNA SQPRFQSMLL TCFAALALLL SAIGLYAVLS
YMVAQRTLEI GVRMALGARR RDVVNLILKH GLGLALVGLV LGMGLSLVLT RYLSSMLYTI
KPLDPVTLLT VTGILLVVAV VASTAPAWRA ARLDPMKTLR DQ
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