Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0591 |
Symbol | |
ID | 4068950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 719798 |
End bp | 720523 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637982596 |
Product | OmpA/MotB family outer membrane protein |
Protein accession | YP_589670 |
Protein GI | 94967622 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGG CCATGATGGT CGTCGTGCTC GCGATGATGA TTGTGGGATC TGCCTGCTCA AACAAGAAGC CGACTCCACC GCCCGCGGCC CCGCCACCGC CGCCAGCTCC GGCGCCAACC GCCACCATTA CGGCGAACCC GAATACGGTC AACGCCGGCC AGCCGACTAC TTTGACCTGG CAGACCACCA ACGCCACTGA CGTCACCATT GATGTCCTTG GCTCGGTCGA TCCGAATGGT TCGAAGCAGG TCACGCCAGT TGAGTCCACT ACGTATCATC TCGTAGCTAA GGGCTCGGGT GGCACGCAGG ATGCAACTGC GCGGGTGACG GTATCAGGGG GCGGCGCATC GCAACCCGAT GAAATCAGCC TCAGCGATCA GCAGGCGTTT GCGAAGTACG TGAAGGACAT TTACTACGAT TACGATGCCT ACACGGTACG CGCGGCTGAC CAGGCGGTGT TGCAGGCGAA TGCCAACTTC TTCAAGCAGC ATCCGAACAT TCACTTCACC ATCGAGGGCC ATTGCGACGA GCGTGGTTCG ACCGAGTACA ACCTCGCACT CGGCGACAAC CGTGCCTCGG CCGCAAAGAA CGCCATTGTT CAGGCGGGCA TTCCTGCGTC GAGCGTTCGC ACCATCAGCT ACGGCAAGGA AAAGCCCTTC TGTACCGAGA GCAACGAACA GTGCTGGCAG CAGAACCGCC GCGCACATTT CGTGATCTCG AAGTAG
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Protein sequence | MKWAMMVVVL AMMIVGSACS NKKPTPPPAA PPPPPAPAPT ATITANPNTV NAGQPTTLTW QTTNATDVTI DVLGSVDPNG SKQVTPVEST TYHLVAKGSG GTQDATARVT VSGGGASQPD EISLSDQQAF AKYVKDIYYD YDAYTVRAAD QAVLQANANF FKQHPNIHFT IEGHCDERGS TEYNLALGDN RASAAKNAIV QAGIPASSVR TISYGKEKPF CTESNEQCWQ QNRRAHFVIS K
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