Gene Acid345_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0534 
Symbol 
ID4069992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp658170 
End bp659345 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content61% 
IMG OID637982539 
Productmajor facilitator transporter 
Protein accessionYP_589613 
Protein GI94967565 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.479778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TTCTCATCAC CATCCACGCC ATCTATGTGC TGGTTGGGAT CGCCAACACC 
ATGCTCGGTC CTCTGTTGCC GCTGCTTGCG GCACGCTGGC AGCTGAGCGA CCGCCAATCG
GGAATGTTCT TCCTCGTGCA GTTCGTCGGA GGTTTCGCCG GGGCAATCTG CTCCACGAAT
CTGGCGAAGC GCTTCCCACT GCACTCCATC GCCAGCGCTG GTCTTTTTCT CACTGCCATC
GGATTCGCCG GCCTTGCCGC TCCCGCGCAG TTGGTAGCCT ACGTCAGCAT CTTCGCGAAC
GGATTCGGAT TGGGCTTGGT TTCCCCGACT CTCACCGCCG CGGTCAGCGA AGCTGTCCCG
CAACACCGCG CCGCCGTGCT CAATCTATTG AATTTTGTTT GGGCATTGGG CGCGATCACC
GCACCGAACC TTGTCCTCAT CGCCTTGCGT CAGAGCGGAT TCTCGGTTCC CGGGATGTTG
CGCGGGTTCG GCCTGGTGCT CGCGATCACC GCGTTACTCG TGCCACGAGT CATCACCACG
CGGCCCGCTG AAGAAGCCGT CGCCGCCGAA CTGCCGTCAA GCACGTGGCG GCTCATCGTC
GCCTGTGGTG TCTTGATCTT CGTCTACGTC GGCATCGAAA ATGGCGTCGC CGGATGGCTC
CCAACCTTCG CCACGCGCGT CCATCGCTTC ACCGTCGAAC GCTCCGCGCT ACTTCAGGAC
ACCTTCTGGA CCACATTCCT CATCGGACGC TTCTGCGCTC CCGCCGTACT ACGCGTCGTC
GCCGAAAGAA TGCTGCTCAC GCTTTCCGTT TGTCTCGCGG CCATCGGCAC CGCCCTGTTG
CTCACAACGA ACTCGCCCCA GATCCTATTT GTTGCGGTAA TGGCAATCGG TGTCGGCTGC
GCACCTGTTT TCCCAACTGC GATCGCGCTC CTCTCCCATC GCCTCTCCGG ACAATCCGGC
ACCAAGCTTG GATATATGTT CGCTTCTGCC GGACTCGGCG CCGCATTCTT CCCCTACTGC
ATCGGCGCTC TTTCTTCCGC AACCAACAGC CTGCGCATTG GGATGTGCTT GTTGCTGTTC
TATGAATGCG CTCTCTTGAT GGCCCACTTC ACCATGTCCT ACTTCGCGGC ACGCACCACG
TCGTCGGCCA TTCAGATTCG CACCCAAGGC GCGTAG
 
Protein sequence
MKRFLITIHA IYVLVGIANT MLGPLLPLLA ARWQLSDRQS GMFFLVQFVG GFAGAICSTN 
LAKRFPLHSI ASAGLFLTAI GFAGLAAPAQ LVAYVSIFAN GFGLGLVSPT LTAAVSEAVP
QHRAAVLNLL NFVWALGAIT APNLVLIALR QSGFSVPGML RGFGLVLAIT ALLVPRVITT
RPAEEAVAAE LPSSTWRLIV ACGVLIFVYV GIENGVAGWL PTFATRVHRF TVERSALLQD
TFWTTFLIGR FCAPAVLRVV AERMLLTLSV CLAAIGTALL LTTNSPQILF VAVMAIGVGC
APVFPTAIAL LSHRLSGQSG TKLGYMFASA GLGAAFFPYC IGALSSATNS LRIGMCLLLF
YECALLMAHF TMSYFAARTT SSAIQIRTQG A