| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0530 |
|---|
| Symbol | |
|---|
| ID | 4069950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 649631 |
|---|
| End bp | 651886 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637982535 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_589609 |
|---|
| Protein GI | 94967561 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.60857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTC GGTGTTATCG CGTCGCATTT CTGATCTTTT GTTTTTGCCT GTCCCTGAAT
CTCTGGTCTC AGTCACCGGC ACTGAACTCA CCGCAAGTTG AGAAGCGCAT CGATCAACTG
CTCAAGCAAA TGACGCTTGA GGAAAAGATT GGCCAGCTCA ATCAATACTC GCAGGGTGCG
GCCACCGGCC CCGGTACCGG CCGCAGCGGC TATCCCGAAA TGGTCTCCAA GGGCGAGATC
GGTTCGATCT TCAACCTGAC CGGCGCGAAA GAGACCAACC AGATGCAGCG CATCGCGATG
GAAAAATCGC GCCTGCACAT TCCTCTCATC TTCGGACTCG ACGTCGTCCA CGGCTATCGC
ACCACCTTCC CCGTGCCTCT CGCTCTTTCT GCTACCTGGG ACCCGGCGCT TATCGAGCGC
GCCGCTCGCA TTGCGGCGAA GGAAGCCAGT ACTGACGGCG TCCGCTGGAC CTTCTCGCCG
ATGGTGGACA TCGCTCGTGA CGCGCGGTGG GGCCGAATTA CTGAAGGAGC AGGCGAAGAT
CCTTATCTCG GATCAGAAAT TGCAAAAGCC TACGTCCGCG GATATCAGGG CTCGCTGGAT
TCGCCCGATA GCATCGCCGC CTGCATGAAG CACTTTGTCG GATACGGCGC GGCCGAAGGC
GGACGCGACT ACAACACCAC AGAAATCTCC GACCGCACGC TGCGCGAGTA TTACCTGCGT
CCCTTCAAAG CCGGTGCAGA TGCCGGCGCG CTCACATTCA TGAGCGCTTT CAATTCTCTG
AACGAAGTTC CAGCCTCGGC CAATCTGTTT ACGCTTCGCC AAATCCTCCG CAAAGAGTGG
GGCTACAAAG GCATGGTTGT GAGCGACTGG CAGTCGCTGC TCGAATTGAA GAACCACGGC
ATCGCCAACG ACGACCGCAC CGCCGCCGCC AAAAGCATTC TGGCCGGTGT GGACATGGAC
ATGGAAGGGA ACATCTACCA CACCGAAATG CTCGATCTCG TGAAGTCGGG CGTAGTTCCG
GTGAGCGTGA TTGACGAATC CGTCCGCAAT GTTCTGCGCG TAAAGATCGC TCTTGGCCTG
TTCGAGCATC CCTATGCCGA CGACACCAAA TCCGCATTCG ACGGCCCGAT CCCCGCAGCC
TATCGCCAGG AAGCGCGTAA AGCCGCCGAA GAATCGTTCA TTCTGCTGAA GAACGACAAC
GCAGGTGGAC ATGCCGTTCT GCCCCTGACG GATGTACACA AAATCGCCGT CGTCGGGCCC
ATGGCCGACG ACGCGGAAGA CATGCTCGGC GCCTGGGGCG CAAAGGGCAA CGCCAAAGAC
GTCGTCACAC TGAAATCCGC GCTGACGGAA TACGCTTCCG CTCATAACAT CGCGGTCACG
TTTGCCGACG ACGCCAATTC GATCCCCGCA GATGCCGACG TCGTCCTCGT CGCCGTTGGT
GAAAATGCCA GTCTGATGAC CGGCGAAGCT GGATCGCGCA CGCACCTCGA TCTGCCCGGA
CATGAGATTG CCGAGGCCGC CGCCAAAAGC GGCAAGCCCG TCGTGCTTCT CGCGTTCAAT
GGCCGCCCCA TCGTCCTCAC CGACGTTGCT CCTAAGATGA ACGCCATCCT CGAGGCGTGG
TTCCCAGGCG TCGAAGCCGG TCCTGCACTG GTGGAAACTC TATTCGGCGT CGCAAATCCG
AGTGGCCGCG TCACCGCGAG CTTCCCGCGT TCGGTCGGTC AGGAGCCGCT CTACTACAAT
GCGCTGAGCA CCGGGCGACC TGCCACCGGT GTGGACCTCA CGCATCCCCC GACAAAGAGT
GAGGAGAAGT ACCATACCCG CTACATCGAC GAGCAGAACG CGCCACTGTA TCCCTTCGGT
TATGGCCTGT CCTACAGTTC CTTTGAGTAT TCGGCGCCGA AACTGAGTGC GGCTTCCGCC
AGCGCCAAGG CGATCAATGC AGGCGACGCA AATGCTGCTA TCAAAGTCTC AGCCATGGTG
AAGAACACCA GCAATCGTCC CGGCGATGAA ATCGTGCAGT TCTACATCCG CCAGCGCGGC
ACCAGCGTGG CGCGTCCGGT GCGCGAATTG AAGGGCTTCC AGAAGGTCAC CCTTGCCGCC
GGCGAAACGA AGAACGTCGA ATTTACGCTC AGCCGCAAAG AACTCGCCTT CTGGAACATT
GACATGAAAG AAGTCGTAGA ACCCGCAGAG TTGAGCGTCT GGATTGCTGG CGACTCGGTG
AGCGGTACTC CCGCGAAGAT CGAAATCAAG CCGTAG
|
|---|
| Protein sequence | MKPRCYRVAF LIFCFCLSLN LWSQSPALNS PQVEKRIDQL LKQMTLEEKI GQLNQYSQGA
ATGPGTGRSG YPEMVSKGEI GSIFNLTGAK ETNQMQRIAM EKSRLHIPLI FGLDVVHGYR
TTFPVPLALS ATWDPALIER AARIAAKEAS TDGVRWTFSP MVDIARDARW GRITEGAGED
PYLGSEIAKA YVRGYQGSLD SPDSIAACMK HFVGYGAAEG GRDYNTTEIS DRTLREYYLR
PFKAGADAGA LTFMSAFNSL NEVPASANLF TLRQILRKEW GYKGMVVSDW QSLLELKNHG
IANDDRTAAA KSILAGVDMD MEGNIYHTEM LDLVKSGVVP VSVIDESVRN VLRVKIALGL
FEHPYADDTK SAFDGPIPAA YRQEARKAAE ESFILLKNDN AGGHAVLPLT DVHKIAVVGP
MADDAEDMLG AWGAKGNAKD VVTLKSALTE YASAHNIAVT FADDANSIPA DADVVLVAVG
ENASLMTGEA GSRTHLDLPG HEIAEAAAKS GKPVVLLAFN GRPIVLTDVA PKMNAILEAW
FPGVEAGPAL VETLFGVANP SGRVTASFPR SVGQEPLYYN ALSTGRPATG VDLTHPPTKS
EEKYHTRYID EQNAPLYPFG YGLSYSSFEY SAPKLSAASA SAKAINAGDA NAAIKVSAMV
KNTSNRPGDE IVQFYIRQRG TSVARPVREL KGFQKVTLAA GETKNVEFTL SRKELAFWNI
DMKEVVEPAE LSVWIAGDSV SGTPAKIEIK P
|
|---|
| |