| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0501 |
|---|
| Symbol | gatA |
|---|
| ID | 4069400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 614484 |
|---|
| End bp | 615926 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637982505 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_589580 |
|---|
| Protein GI | 94967532 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA ACGTACTCAC CATCGACGCA ACTCGCATCG CGATCCAGGA GCGCCAGGCC
ACAGCCACGG CAATTGCCGA ATCGTTCTAT AAGAAGATCG AAGCCGAAGA CGGAGAGATC
AACGCCTACC TCACGTTGAG CCGCGACCGC GCGCTCGCGC AGGCCGCCAA GATTGACGCC
ATTGCCGACC GCGGTGACGA CCTCCCCCGC CTCGCCGGCC TCCCCGTCGC CATCAAAGAT
GTCATCTCGA CCAAGGGTGT TCGCACCACG GCAGGATCGA AGATCCTCGA AGAGTTCATT
GCCCCCTACG ACGCCACGGT CGTGCAGAAG CTCGAAGCCG CCGGCGCCGT CATCCTCGGC
AAAACCAATT GCGATGAGTT CGCCATGGGC TCGTCGAACG AGAACTCAGC CTATGGCCCG
GTGCGAAATC CCCGCGATAA GTCTCGCGTC CCCGGCGGAT CATCCGGTGG ATCGGCTGCG
GTCGTCGCCG CCGGAACTGC GGTCACTTCG CTCGGTTCGG ATACCGGCGG TTCCATTCGC
CAGCCCGCGT CGTTCTGCGG CGTGGTCGGG TTGATGCCGA CCTACGGCCG CGTTTCGCGC
TACGGCCTGA TTGCGTTTGC CTCGTCGCTC GATCACATCG GTCCGTTCGC CAAAGACGTA
AAGGACGCGG CGATCATGCT CGAAGTGATT GCCGGTCGTG ATCCGATGGA TGCCACTTCC
GCCGAGGTCG CAGTCCCGAA GTACTCCGAC GAAATCGGCA AGCCCGTTCG CGGAATGAAA
ATTGGTGTCG CGAAAGAATA TTTCGGCGAA GGCCTCGATC CCGAAGTGAA AGCCTCAGTC
GAAGCGTCCA TCCAGAACCT CGCCAAGGCC GGCGCGGAGA TCATCGAGGT CTCGCTGCCG
CACACCAAGT ACGCCATCCC TACGTACTAC CTCGTTGCTA CCGCCGAGGC ATCGTCGAAC
CTCGCGCGCT TCGACGGTGT CCGCTACTCG CACCGTTCGA AAGAAGCGAA AACACTCTCC
GAGATGTACC GCAAGAGCCG CGACGAAGGC TTCGGCGCCG AAGTCAAACG CCGCATCATC
CTCGGCACCT ACGCACTCAG CGCCGGCTAC TACGACGCCT ACTACCTTAA GGCGCAGAAA
GTCCGCACCC TGCTGGCCCA GGACTTCGAC GAAGCCTTCG CCAAAGTCGA CGCGATCGTC
ACGCCCACCA CGCCGACGCC GGCGTTCAAG CTTGGCGAAA AAGCCGACGA CCCGCTAGCC
ATGTACCTCG CCGACATCTT CACGGTCACC GCCGATCTTG TCGGCATCCC GGGAATCTCG
GTCCCCTGCG GGAGTTCCAA AGACGGTCTT CCCATCGGTC TGCAGGTCTT CGCGAAACAC
TTCCAGGAAG CGACAATGAT CCGCGTGGCC CACGCCGTGG AACACGCGCT GGCTGCGGTG
TAG
|
|---|
| Protein sequence | MDINVLTIDA TRIAIQERQA TATAIAESFY KKIEAEDGEI NAYLTLSRDR ALAQAAKIDA
IADRGDDLPR LAGLPVAIKD VISTKGVRTT AGSKILEEFI APYDATVVQK LEAAGAVILG
KTNCDEFAMG SSNENSAYGP VRNPRDKSRV PGGSSGGSAA VVAAGTAVTS LGSDTGGSIR
QPASFCGVVG LMPTYGRVSR YGLIAFASSL DHIGPFAKDV KDAAIMLEVI AGRDPMDATS
AEVAVPKYSD EIGKPVRGMK IGVAKEYFGE GLDPEVKASV EASIQNLAKA GAEIIEVSLP
HTKYAIPTYY LVATAEASSN LARFDGVRYS HRSKEAKTLS EMYRKSRDEG FGAEVKRRII
LGTYALSAGY YDAYYLKAQK VRTLLAQDFD EAFAKVDAIV TPTTPTPAFK LGEKADDPLA
MYLADIFTVT ADLVGIPGIS VPCGSSKDGL PIGLQVFAKH FQEATMIRVA HAVEHALAAV
|
|---|
| |