Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0485 |
Symbol | |
ID | 4068610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 599409 |
End bp | 599846 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637982489 |
Product | BadM/Rrf2 family transcriptional regulator |
Protein accession | YP_589564 |
Protein GI | 94967516 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) [TIGR02944] FeS assembly SUF system regulator, gammaproteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0373904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAGC TCACTAAAAA GGCGGATTAC GGGTTGATTG CCATGCGGCA CCTGGCGGCG AATGCCGACT TAGGCGCCTG TTCGGCGAAG GACCTAGCTG AGATGTATGG GCTTCCGCAA GAGGCTTTGG CGAAGCTGCT TCAGCGACTG ACGAAGGCGG GGCTTTTGCA GTCGCAACAG GGGACGAATG GTGGTTACAC GCTGGCGCGC AATCCGCGGA GCATTTCGGC GCTGGATGTG ATCCGGGCGC TGGAAGGTCC GCTGTTCATG ACGTCGTGCA CGACCGCGAA GGGGAGCTGC GAGCAGACTT CCAAGTGCAC GGTGCGCGAA CCGCTGCGCA AGGTGAGCAA GAGTATTGAG GATGTATTGG GCCGGTTGAC GATCGCAGAG ATGTGCGAGA GCGAAGAGCC GGTGAGAGAT CTGGTCACAC TGCAATAG
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Protein sequence | MLKLTKKADY GLIAMRHLAA NADLGACSAK DLAEMYGLPQ EALAKLLQRL TKAGLLQSQQ GTNGGYTLAR NPRSISALDV IRALEGPLFM TSCTTAKGSC EQTSKCTVRE PLRKVSKSIE DVLGRLTIAE MCESEEPVRD LVTLQ
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