Gene Acid345_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0485 
Symbol 
ID4068610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp599409 
End bp599846 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content59% 
IMG OID637982489 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_589564 
Protein GI94967516 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02944] FeS assembly SUF system regulator, gammaproteobacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0373904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGC TCACTAAAAA GGCGGATTAC GGGTTGATTG CCATGCGGCA CCTGGCGGCG 
AATGCCGACT TAGGCGCCTG TTCGGCGAAG GACCTAGCTG AGATGTATGG GCTTCCGCAA
GAGGCTTTGG CGAAGCTGCT TCAGCGACTG ACGAAGGCGG GGCTTTTGCA GTCGCAACAG
GGGACGAATG GTGGTTACAC GCTGGCGCGC AATCCGCGGA GCATTTCGGC GCTGGATGTG
ATCCGGGCGC TGGAAGGTCC GCTGTTCATG ACGTCGTGCA CGACCGCGAA GGGGAGCTGC
GAGCAGACTT CCAAGTGCAC GGTGCGCGAA CCGCTGCGCA AGGTGAGCAA GAGTATTGAG
GATGTATTGG GCCGGTTGAC GATCGCAGAG ATGTGCGAGA GCGAAGAGCC GGTGAGAGAT
CTGGTCACAC TGCAATAG
 
Protein sequence
MLKLTKKADY GLIAMRHLAA NADLGACSAK DLAEMYGLPQ EALAKLLQRL TKAGLLQSQQ 
GTNGGYTLAR NPRSISALDV IRALEGPLFM TSCTTAKGSC EQTSKCTVRE PLRKVSKSIE
DVLGRLTIAE MCESEEPVRD LVTLQ