| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0356 |
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| Symbol | |
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| ID | 4069598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 393335 |
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| End bp | 395029 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982359 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_589435 |
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| Protein GI | 94967387 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.171609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.628947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAC GGCTCCTCGT CCTTTCGCTC TTCTTCGCAT TCGCTCTCCC TGTTCTCGCT
CAAACCACAG ATGCCGACTG GTGGCGTCAT GCGGTTATCT ACGAGATTTA TCCGCGCAGC
TTCGGCGATT CCAACGGCGA CGGCCTCGGC GATCTCAACG GCATCACCGA GCACCTCGAC
TACCTCAAGG AACTTGGGGT GGACGGCATC TGGATCTCGC CGTGCTTCCC TTCGCCGCAG
GTGGACTTCG GTTATGACGT GAGCGATTAC ACGGCGATCG CGCCGGAGTA TGGCACCATG
GCTGACTTCG ATCGCCTGAT GGCCGAAGCC AAGAAGCGCA ATATTCGCGT ACTGCTCGAC
TTCGTGGTGA ACCACTCGTC CGACAAGCAT CCGTGGTTCA TCGAGTCTGC GTCGTCGCGC
ACCAACCCGA AAGCTGACTG GTACGTTTGG AAGGACGGCA TTGGCGCCGA TAAGAAGCAG
GTGCCGACTA ATTGGATCTC GCTCTTTGGA CACTCGGCGT GGGAGTGGGA CTCGAAACGC
AATCAGTTCT ACTACCACAT GTTCGCCAAG GAACAGCCGG ACCTGAACTG GCGCAATCCG
GAAGTGCAGA AGGCAATGTA CGGTGCGATG CGCTTCTGGA TGGACAAAGG CGTCAGCGGC
TTCCGCCTCG ACGCCGTGGA CACGCTCTTC GAAGATCCCA ATCTGCACGA CGACCCCATT
CTTCCCGGTA AAAAGAATGC GTATGGCGAT CAGGACGTCG AGCACAAATA TACGCAGGAC
CTGCCGGAGA CCCATGATGT TTATCGCGCA ATGCGCCATG TAACGAACCA ATATCCCGGC
GGCGTGCTCG TGGGCGAGGT TTATTTCGAT ACCGCCGCGC AGATGGCGAC GATCTATGGC
AAGAACAACG ATGAGATCAA TCTCCCGATG GCGACGCAAC TCGGCTTCAC CAATAAGCGC
GATGTATCGG AGATCCGGCG CAAACTCGAT GACCTGATGA CGTTGCCTGC GACCCAGACC
GCGCTCATGG TTTTCGATAA CCACGACAAC GCGCGCAGCT GGGACCGCTA TGGCAACGGG
CTGAACGATG CACAGCGCGC GCAATTTGCG AAGGTTGTCG CCGCCACTCT GCTGACACCG
CGCGGCAGCG CGCTGATGTA CTACGGCCAG GAGATCGGCA TGAAGACCAC AACGCCGACG
CGCCGAGAAG AGGTGAAAGA CCCCATCGGC CGCACTGGAT GGCCCAAAGA AAAAGGCCGT
GACGGCGAGC GCACACCGAT GCAGTGGAGC AACGCGAAAG ACGCGGGCTT CAGCAGTTCG
GATCATCCTT GGCTGCCGGT GCCGCCCACC TTCAAGCAGG TCAATGTCGC CGCAGAAGAC
AAAGACCCGA ACTCAGTCCT GAACTTCTAT CGCGCGATGC TGAAACTCCG GCGCGAAAAT
CCGGTGTTTC GCGATGGTGA CTACAAGGGC GTAAATGAGA ACAACAGCAA TGTTCTTGCC
TTCACACGTA CCTCACCCCA AGGCACCGTG CTCGTGGTGT TGAACTACAG CGACAAAGCA
CAGACGGCCG ACTACTCGCA ATCGGGCAAG GAAGCCAGAA CATTGTTAAG CACGTTTTCG
AAATCCGACG GCGCGCAGAA ACTGAACGCG CTTACGGTTC CGGCCTTCGG TGTCTTCATC
GGCCAAGTTC AATAA
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| Protein sequence | MIKRLLVLSL FFAFALPVLA QTTDADWWRH AVIYEIYPRS FGDSNGDGLG DLNGITEHLD
YLKELGVDGI WISPCFPSPQ VDFGYDVSDY TAIAPEYGTM ADFDRLMAEA KKRNIRVLLD
FVVNHSSDKH PWFIESASSR TNPKADWYVW KDGIGADKKQ VPTNWISLFG HSAWEWDSKR
NQFYYHMFAK EQPDLNWRNP EVQKAMYGAM RFWMDKGVSG FRLDAVDTLF EDPNLHDDPI
LPGKKNAYGD QDVEHKYTQD LPETHDVYRA MRHVTNQYPG GVLVGEVYFD TAAQMATIYG
KNNDEINLPM ATQLGFTNKR DVSEIRRKLD DLMTLPATQT ALMVFDNHDN ARSWDRYGNG
LNDAQRAQFA KVVAATLLTP RGSALMYYGQ EIGMKTTTPT RREEVKDPIG RTGWPKEKGR
DGERTPMQWS NAKDAGFSSS DHPWLPVPPT FKQVNVAAED KDPNSVLNFY RAMLKLRREN
PVFRDGDYKG VNENNSNVLA FTRTSPQGTV LVVLNYSDKA QTADYSQSGK EARTLLSTFS
KSDGAQKLNA LTVPAFGVFI GQVQ
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