| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0347 |
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| Symbol | |
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| ID | 4069589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 380518 |
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| End bp | 381720 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637982350 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_589426 |
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| Protein GI | 94967378 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.145586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.218991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGGT ATATCGCTCG GCAGGCCATT CTCGACACAC GACAGCAGAC ATTCGGCTAC
GAGTTGCTCT ACCGCGCGGC AGCGGAGAAC TTTGCGCGCA TTGGAGATCC CGATGAAGCG
GCGCGGCGAA CCCTCGATGA TCTTCTAACG CTCGGCGTAA AGGAGCTGTC GCGCGGGAAG
CAGTTGTTCC TCAACTGTAC CCACGAGTTG CTGGCGCAAG GATTTGTGAA GTTGCTGCCG
ACACAGAACC TTGTACTCGA GATCCTGGAG ACGGTGGTTC CCGACCACGA CTTACTACAG
AGCTGCGCTG AACTCAAGGC CGCGGGATAT TCGCTCGCGC TCGACGACTT CATTCCCGGT
CCAAACACGC TACCGCTGGT GGAGTTTGCC GATTACATCA AGCTGGATTT CCGCGCGATG
CCGCTTGAGG AATGCGGTGC GCTGGTGCAG CAATTCGGAA AAAAGATCGA GTTCCTGGCA
GAGAAGGTCG AGACGCTCGA AGAATTCACG GCCGCGAGCG ATATGGGCTG TTCGCTTTTC
CAGGGATTTT TCTTCGCGCA ACCTGCGCTG CTAACGATGC GCCAGATTCC GCCGATGTAT
GTGAACTACA TCCGATTGCT CGACGCGACG TGCAAGCCGG ACTTCAACTT CGCGGAGATT
GAGGCAATCA TCAAGACCGA CGTTGCGCTC TCTTACAAGC TGCTGCGCTT CCTCAACTCG
GCGGCGTTTT GTATACGCTC GACCATCACC TCTCTGAGAC AAGCGTTGAT CATTCTTGGC
GAGAATGCAA TTCGGCGCTG GGTTGCGGTG AGCGCGGCTG CCAATGCAGC GACAGGCAAG
CCGCCGGAAC TTCTCATCTC GGCGCTGCTG CGTGCGCGCT TTTGCGAACT ACTCGCGGTT
GGCGCGCATA GCAATCCGTA TTGGGCGTTT ACGGTCGGAT TGTTTTCCAT GCTCAGTCCG
CTGCTCGATA CGCCGTTGGA AACGATTCTT GCCAGCGTTC AGTTGCCGGA CGAAGTGCGC
GCGGCGCTGC TCGGCGAATC CGGCCAGTTG CGCACGCTGT TCGAGCTGGT GTGCGGGTAT
ATCGAAGGCG ATTGGATCGC GATTACGCCG AAGTGCCTGG CACTGGGATT GGCGCAGAAG
CAGGTGACGA GTTGTTATCT CGAGGCAGTG AGGTCGGTGG ATGCGTTGAT GGCGCTAGCG
TGA
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| Protein sequence | MLRYIARQAI LDTRQQTFGY ELLYRAAAEN FARIGDPDEA ARRTLDDLLT LGVKELSRGK
QLFLNCTHEL LAQGFVKLLP TQNLVLEILE TVVPDHDLLQ SCAELKAAGY SLALDDFIPG
PNTLPLVEFA DYIKLDFRAM PLEECGALVQ QFGKKIEFLA EKVETLEEFT AASDMGCSLF
QGFFFAQPAL LTMRQIPPMY VNYIRLLDAT CKPDFNFAEI EAIIKTDVAL SYKLLRFLNS
AAFCIRSTIT SLRQALIILG ENAIRRWVAV SAAANAATGK PPELLISALL RARFCELLAV
GAHSNPYWAF TVGLFSMLSP LLDTPLETIL ASVQLPDEVR AALLGESGQL RTLFELVCGY
IEGDWIAITP KCLALGLAQK QVTSCYLEAV RSVDALMALA
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