| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0325 |
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| Symbol | araD |
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| ID | 4070087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 352697 |
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| End bp | 353395 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637982328 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_589404 |
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| Protein GI | 94967356 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.486164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTTTAT TGCAACTCCG TGCAGAAGTC CTTGAAGCGA ACCTCGAGTT GGTGCGGAAA
GGGCTCGTTC TATATACCTT CGGCAATGTC AGCGGGGTCT CCCGCGAGCA AGGCCTGATT
GTGATCAAGC CCAGCGGCGT TCCCTACGAC ACGATGAAAC CCGAACATCT GGTCGTCACT
GACATGGAAG GGAAGATCGT GGAAGGCGAC CTCCGCCCTT CATCCGACCT CGCGACGCAC
CTTGCGCTCT ATCGCGCATT TCCGGAGATC GGCGGCGTCG CCCACTCGCA TTCCGAATAC
GCCACTGCTT GGGCACAGGC CCGGCGCCCG ATTCCCTGCT TCGGCACAAC GCATGCCGAC
TACTATCACG GTTCAGTCCC AGTCACTGAT CCCATGGCAG ACGAGGAAAT CACGGGTGAT
TATGAGATGA ATACCGGCCA CGCCATCGTG CGCACGTTAC ATAAAACTGG CGCAGCGCAT
GTCCCGGGAA TCCTTGTGGC GAACCACGGT CCATTTGCCT GGGGGGCCAG TGCGATGAAG
GCGGCCGAGA GTGCCGCGAT CCTCGAATAC ATTGCGCGAA TTGCGTGTTT CACGCTGTCG
ATCAACGGAT CCTCGGCGGC GATTGGACAA GCCCTGCACG ACAAGCATTT CCTGCGCAAA
CACGGAGCAA ATTCTTATTA CGGCCAGAAG AAGGACTGA
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| Protein sequence | MLLLQLRAEV LEANLELVRK GLVLYTFGNV SGVSREQGLI VIKPSGVPYD TMKPEHLVVT
DMEGKIVEGD LRPSSDLATH LALYRAFPEI GGVAHSHSEY ATAWAQARRP IPCFGTTHAD
YYHGSVPVTD PMADEEITGD YEMNTGHAIV RTLHKTGAAH VPGILVANHG PFAWGASAMK
AAESAAILEY IARIACFTLS INGSSAAIGQ ALHDKHFLRK HGANSYYGQK KD
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