| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0297 |
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| Symbol | |
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| ID | 4070518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 316370 |
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| End bp | 318811 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637982298 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589376 |
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| Protein GI | 94967328 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.655759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCGCTG CTCTCCAGGA TCTGAAGTTC GCCCTCAGAA CCCTAAAAAA ATCGCCCGGA
TATGTCATCG CTGCGCTGGT GGTGATGGCG CTTGGCATAG GCGCGAACAC TTCGCTGTTC
ACGGTGGTGA ACGCGGTGTT GTTGCGGGCG CTTCCCTTTG GGCATCCGGA GCAGCTAGTG
GTGTTGTGGC ATACGCCTCC GCAGAGCAGT TTTCCCGGGG TGAAGATCTT CCCCCTCTCC
GCGGCGAACT ACCTCGACTG GGAAAAGCAG AACACCGTTT TCACGCAGAT GGCGGTCTCG
TCGTACCGGA CGATGAACCT GACCGGCAAC GGGGAACCAC TGTCGCTGCC GGACGAGGCG
GTGTCAAAGA ACTACTTTTC CACGCTGGAA GCGCTGCCGA TGCTCGGCCG AACCTTCGTG
CCCGAAGAGG ACGCGGATGG CAAGAACAAG TCGGTGATCC TGAGCTACCC GCTTTGGAAG
GACACGTTCG GGGGCGATCC AAAGATTGTC GGCAAGCAGA TCACGCTGAA CAACCAGGCT
TATGACGTGG TCGGCGTAAT GGGACCGGAG TTTCGCTATC CGTCGTTCGC GCGGATTTGG
ACGCCGCTGG GCATGACCCC GAAAGAGGCC GTGGTTCGCG GCGAACACCA CTATCGCGTG
ATTGCACGGT TGAAACCTGG CGTCTCGCTG CACCAGGCGC AAGCCGACCT CAGCACGATT
GCGAAGCAGT TGGAGCAGCA GTATCCCGCC GACGATAAAG GTTGGGGTGC GGCGGTGGTG
CCGCTACGTG AGCAGATGGT AGGCGATGTA CGTCCGACGC TGCTGGTGCT GCTTGGCGCG
GTCGTGTTCG TGCTGTTGAT TGCATGTGCC AACGTGGCGA ACCTCACGCT GGTTCGCACG
CTGGGGCGAA GCAAGGAGAT GGCGATACGT ACCGCGTTGG GCGCGGGCAG AAACCGAATC
ATTCAGCAGG TGTTGGCGGA ATCCATGCTG CTGGCGATTG CGGGTGGCGC AATCGGCGTG
GCGCTCTCAC AATTTGGCAC GAAGCTGATA ACGAACGTTC TGGCGGACCA ACTGCCCAGG
ACCTTCCAGG TGCACATGGA TGTAACCGTG CTGTTCTTCA CGCTTGGACT GGTGCTGCTC
ACCGGCCTGG CAGCGGGTTT CGTTCCTGCC TGGAAGGCGA CGCACTCGAA TCCGAATGAT
GCGCTGAAGC AAGGACTCGG CCGCACCGAT AGCGATGGCG GCGGCAAGAC GCGCAACGTG
CTGGTGGTCG TCGAAGTTGC GTTGTCGCTG GTGCTGCTCT TTGGCGCGGG CCTGATGATC
CGCACGCTGT GGGCGCTGCA TGCGGTGAAT GCCGGATTCG ATCCGGAGAA CGCGCTTTCG
ATGTCGGTGA TCGTAGGCCC AAACAAACTG CCGAATGAAG TGGCGCAGGC ACAGTACTAC
CAACGCATCG TTGAGCGTTT GCGAGCGATG CCAGGTGTGC AGAATGCCGG CACGGTGGAT
AGCCTGCCGA CACAAGGCGG ATCGATGCAG CCGGTTGGGC TGGAGGGGCA TCCGGTGGTG
GCGATGGCCG ACCAGCCAGA AGTGAATGTG CGTATGGTGT CGCCGGGATA CCTGGCGACG
ATGCGGATTC CGCTGTTGCA AGGGCGCATG ATCGCCGACG CCGACAACGA GCACACTCAT
CCTGTGGCGA TCATTAGCCA GGCGATGGCG AAGCGGTTCT GGCCCGGGCA GGATGTGATT
GGCAAACATC TGACGCTCAC ATTCCAGGGC GATACGCAGT TGGAGATCGT TGGTCTTGTG
GGCGATGTGC GGCAGTCGGG CCTCGATTCC AACGAAGATG ATGCGACCGT GTACTATCCG
TCGGCGCAAC TGATTTTTCC CCCGGCGTAC ACGTGGCATT CGTTTCCGCT TTCGCTGGTA
GTGCGTACGG CGGGGAATCC GGAGGCGATG CAGCCCGCGA TCCTGGCGGC GATCCACGAA
ATCGATAGCG AAGTGCCGGT AACCGAAGTG ATGACGCTGA ACCAGGTGCT CGGCGAGTCG
ATTGCGCAGC AACGGTTCAC GATGATCCTG CTGGAAGCCT TCGCCGGACT GGCGCTGCTA
CTGGCAGCGG TGGGGATTTA TAGCGTGCTG GCGTACTCGG TGCGGCGGCG CATGCGTGAT
ATCGGCATTC GCATGGCGTT GGGCGCGCTG CCCTCGCAGG TGCTGCGCAT GGTGGTAATG
GAAGGCATGC GGCCAACGAT CATCGGCGTG GTGATCGGGT TGGCCTCGGC GATGGCGATT
GGCAGGCTGC TGAAGTCGGT TGTATTCGGC GTAAAGACGA CGGATTTCGC AACCTTCGTC
GCAGTGTCGG TGGTGCTGCT GTTCATCGCG GTGATGGCGA GTTTGTTGCC GGGATATCGC
GCGATGAAAG TAGAGCCGAT GAAGACGCTG CGGGAAGAAT AG
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| Protein sequence | MRAALQDLKF ALRTLKKSPG YVIAALVVMA LGIGANTSLF TVVNAVLLRA LPFGHPEQLV
VLWHTPPQSS FPGVKIFPLS AANYLDWEKQ NTVFTQMAVS SYRTMNLTGN GEPLSLPDEA
VSKNYFSTLE ALPMLGRTFV PEEDADGKNK SVILSYPLWK DTFGGDPKIV GKQITLNNQA
YDVVGVMGPE FRYPSFARIW TPLGMTPKEA VVRGEHHYRV IARLKPGVSL HQAQADLSTI
AKQLEQQYPA DDKGWGAAVV PLREQMVGDV RPTLLVLLGA VVFVLLIACA NVANLTLVRT
LGRSKEMAIR TALGAGRNRI IQQVLAESML LAIAGGAIGV ALSQFGTKLI TNVLADQLPR
TFQVHMDVTV LFFTLGLVLL TGLAAGFVPA WKATHSNPND ALKQGLGRTD SDGGGKTRNV
LVVVEVALSL VLLFGAGLMI RTLWALHAVN AGFDPENALS MSVIVGPNKL PNEVAQAQYY
QRIVERLRAM PGVQNAGTVD SLPTQGGSMQ PVGLEGHPVV AMADQPEVNV RMVSPGYLAT
MRIPLLQGRM IADADNEHTH PVAIISQAMA KRFWPGQDVI GKHLTLTFQG DTQLEIVGLV
GDVRQSGLDS NEDDATVYYP SAQLIFPPAY TWHSFPLSLV VRTAGNPEAM QPAILAAIHE
IDSEVPVTEV MTLNQVLGES IAQQRFTMIL LEAFAGLALL LAAVGIYSVL AYSVRRRMRD
IGIRMALGAL PSQVLRMVVM EGMRPTIIGV VIGLASAMAI GRLLKSVVFG VKTTDFATFV
AVSVVLLFIA VMASLLPGYR AMKVEPMKTL REE
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