| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0289 |
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| Symbol | |
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| ID | 4068833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 303445 |
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| End bp | 305862 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637982290 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589368 |
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| Protein GI | 94967320 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.655759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACT TGCTGCAGGA CATCAAGTTC GGGGTTCGCA CGCTGCTGCG CAGTCCGAGC
TTCACCGTCG TTGCCGTGTT GACCATCGCG CTCGCCATCG GCGCGAATAC GGCGATGTTC
AGCGTGATCA ACGCCGTCCT CCTGCGGCCT CTACCGTACA ACCAGCCCGA CCGCGTCATG
GCCGTGTGGC AATACGATGC GAACCAGCAG ATCAACGCCT TCACCACGCC GAACTTTGTC
GAGTGGAAGC GCCAGGGCGG CATCGTCGCA CAGCTTTCTG CGTTCACGTC CACGGCATTC
AATATCGCGG ACCAAGATGT TCCCGAGCGC GTCGCCGGTG GCAACATGCA ATACGAATTG
CTGCCGAACT TCGGAGTGCA GCCGGTCCTC GGCCGCAACT TCACGCCGGA AGAAGACAGC
CTCAACGGAC CGCCGGTCGC CATCCTCAGC AACGCCATGT GGCGTACCCG CTTCAATTCC
GATCCCAACA TCCTGAACCA GACCATCAAG CTCGACAGCG TGGCGTACAC CATCATCGGC
GTCATGCCGG CGAATTTCTA CGTTCTGAAC CGCAACGAAC TTCTCTGGAC GCCCCTCAAG
CTCAACCCCA CCGATCCGTC GAAATCGCGC CGCATTCACT GGATGTGGGG TTTCCTCCGC
CTGCCTGACG GCATGACGAA GAAACAAGGC GATGCGGAAG TCAACGCCAT CACTGCGCGC
CTGAAAGCGC AAGACCCCAG CGGCGACGCC TCGCGTGGCC TGCAACTCCA GTCCATGCCG
GAGTTCGTTT ACGGCGACGT GAAGCCCGCT CTGCTGTTGC TCATGGGTTC CGTCGGACTT
GTGCTGCTGA TCGCATGCGC CAACGTGATC AATCTTCTCC TCGCACGCGG GGCCGCACGC
CGCAGCGAAC TCTCGGTTCG TAGCGCCCTC GGCGCACCGC GCGCGCGACT CATCCGTCAG
CTTCTCACCG AGAGTCTCGT GCTCTCGATT TGTGCCGGAG CGCTTGGCTT GGGCCTCGGA
GCGCTTGCGC TGAAATCTCT TCTCGCGATG CATCCTACGA ACATCCCGCG TGTCGAAGAA
GTTCGCATTG ACGGTTGGGT GCTCGGCTTT ACATTCCTCG TCTCGCTCCT CGTCGGCGTG
ATTTTCGGAC TCGCACCCGC GGTGACCGCG TCGCGCGCGA ACGTCGCCGA AGTCCTGAAA
GACAGCATGC GCACCTCCAG CGGGCGCATC GGCCGGCAGC GCTCGGTCTT CGTCTTCGCG
GAAACCGCGC TGGCTTGCAT GCTGCTCATC GGCGCGGGGC TCGCGTCGAA ATCCATTTGG
AAATTGCAGA AGGTCGACCC TGGCTTCAAT CCGCATAACG TCAGCGTGCT GCGCGTCTCG
GCGCCGCGAT CGCTGCTGCC GGCGCAACTG CCAGAGTTCT ACCGCCGCAT CTTCGAACGC
GTCAGCACGC TACCCGGCGT CGAAGCTGCC GCTCTCGGGC GCGACCTTCC GATGAGTGGC
GCCGCCGATC CTTCCATGCC GATCACGATT GACGGCAACA CGCCTGCGCT CGCCGAGGGC
GAAGTCATTA CCCGTTTCCG CTCCATCACG CCGAACTACT TCCGCACGCT GCAAACGCCC
GTCCTGCGCG GCCGCGAATT CGCCGACACC GATACCTCCA CTTCGCAGCC CGTCGCGATC
GTGAGCAAAT CTCTCGCGGA CCGCTATTGG CCGAACGAAG ATCCCGTCGG CAAGCGACTG
AAGCCCGAAA TTCCGGACGC TCCGTATTAC ACCGTCGTCG GTGAAGTTGC CGATGTTCGC
CACTGGAGTC TCGACATTCA AGTCGAGCCC ACCGCGTACT ACCCGTACAC GCAGCTTCCG
CCGAGCATCG TCGCGCTCTT CCAGAAGAAC ATGTCCATCG CGGTTCGAGG AACTGCGGGC
GGCATCGTTC CGTCGGTGCG CGCCGCTGTC GGCGAAATTG ATAAGACCGT GCCCGTCTTC
AACGTTCACA CCATGGACGA ACTCTTTTCC GACTCCGGTT CGCTCCGCCG CTTCGACATG
GCACTGCTGC TCAGCTTCGC CGGACTCGCA CTGGTGCTCT CGGCGATCGG CGTTTACGGC
GTCATCGCGT ACTCCGTCGC GCAGCGCACG CGCGAAATCG CTATCCGGAT GGCCGTCGGC
GCGCAGCGCA AGGATGTATT TGAGCTGGTC ATCGCCCAGG GTGCGAAGGT CGCTGGTGTC
GGCGTGGTTG CCGGCGTAAT CGGAGCACTG CTGCTGGCGA AGGTGATGTC GAGCTTGCTC
TACGAGGTGA ACCCGCGCGA CCTGCTGACG TTCTGCACGG TCCCATTCAT CCTGATGGTG
GTGATCCTGC TCGCGTGCTA CATCCCTGCG CATCGCGCGG CTTCGGTCGA GCCGAACACC
GCCCTGCGCT ACGAGTAG
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| Protein sequence | MNNLLQDIKF GVRTLLRSPS FTVVAVLTIA LAIGANTAMF SVINAVLLRP LPYNQPDRVM
AVWQYDANQQ INAFTTPNFV EWKRQGGIVA QLSAFTSTAF NIADQDVPER VAGGNMQYEL
LPNFGVQPVL GRNFTPEEDS LNGPPVAILS NAMWRTRFNS DPNILNQTIK LDSVAYTIIG
VMPANFYVLN RNELLWTPLK LNPTDPSKSR RIHWMWGFLR LPDGMTKKQG DAEVNAITAR
LKAQDPSGDA SRGLQLQSMP EFVYGDVKPA LLLLMGSVGL VLLIACANVI NLLLARGAAR
RSELSVRSAL GAPRARLIRQ LLTESLVLSI CAGALGLGLG ALALKSLLAM HPTNIPRVEE
VRIDGWVLGF TFLVSLLVGV IFGLAPAVTA SRANVAEVLK DSMRTSSGRI GRQRSVFVFA
ETALACMLLI GAGLASKSIW KLQKVDPGFN PHNVSVLRVS APRSLLPAQL PEFYRRIFER
VSTLPGVEAA ALGRDLPMSG AADPSMPITI DGNTPALAEG EVITRFRSIT PNYFRTLQTP
VLRGREFADT DTSTSQPVAI VSKSLADRYW PNEDPVGKRL KPEIPDAPYY TVVGEVADVR
HWSLDIQVEP TAYYPYTQLP PSIVALFQKN MSIAVRGTAG GIVPSVRAAV GEIDKTVPVF
NVHTMDELFS DSGSLRRFDM ALLLSFAGLA LVLSAIGVYG VIAYSVAQRT REIAIRMAVG
AQRKDVFELV IAQGAKVAGV GVVAGVIGAL LLAKVMSSLL YEVNPRDLLT FCTVPFILMV
VILLACYIPA HRAASVEPNT ALRYE
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