| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0237 |
|---|
| Symbol | |
|---|
| ID | 4073087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 249625 |
|---|
| End bp | 250791 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637982238 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_589316 |
|---|
| Protein GI | 94967268 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAAA GACCTTCGTC TGACCCTAGA ACCTCGCATC GTGACCTGTT TGCCCACTTG
AAAGACCAGC AATCGGCCAT GCAATCCATG CTCCGCCGCA TCGTGGAACA CGAGTCCCCG
AGCGACGATA AACCTTCCTG CGACGCCATG GCCGAAATGC TAGCGCAGGA TTTCGGCGCC
ATCGGCGGCC GCACGAAACT CCATCGCGAC AAGATCACCG GCAATCACCT GCAAGTGGAT
TTCGGCGGAC CGCGCGGCGC GAAGCCGGTG CTGATCGTCG GACATTACGA CACGGTCTAT
CCGCTCGGCA CTCTGAAGCA GATGCCGTAC CGCGAGAGCA AAGGTCGCAT CAGCGGTCCA
GGTGTGCTCG ACATGAAGGG CGGCATCGTC CAAATTCACG GCGCCATCGC CGCACTGCAG
ACCCAAGGCG GGTTGCCGCG ACCAGTGACG ATCATCCTCG TCTCCGACGA GGAGACCGGC
AGCGAGAGTT CCCGGTCGAT CACCGAGAAG CTCGCGAAAC AATCCGCAGC AGCGTTTGTC
TGTGAGCCGG CCGCTGGCAC CGACGGCGCG CTGAAGACCG CGCGCAAAGG CGTCGGCGAC
TATTTGTTGC GTATCACTGG CGTGGCTTCC CACTCGGGAC TCGATTTCGA GAAGGGCCAG
AGCGCGGTGC TGGAACTTGC GCGACAGATT GAGAAAATCG CCGGCTTCAC CGATCTCAAG
CGGGGAACCA CGGTCAATCC CGGCGTCATT CGCGGTGGAA CCCGCAGCAA CGTGATCGCT
GCGTCGGCGG AAGCGGAAAT CGACGTGCGC GTGAGCACCA AGCGCGATGT CGAACGCGTT
TCGAAGCTGT TTGCACGGTT GAAACCGATC AATAGGCGCT GCTCGCTAGC TCTTTCCGGC
GGAGTCAACC GTCCGCCGAT GGAGCGCACT CCGGGCACCG CAGCTTTATT TGCGCAGGCG
CAGCTGATCG CTGCGGAACT CAGCTTTTCC CTAGCGGAGA GAATGGTGGG GGGCGGTTCC
GACGGCAACT TCACCGGGGC TATCGTGCCG ACTTTAGACG GGTTAGGCGC GGTCGGCGAC
GGAGCCCACG CGGTTCACGA ATATATTTTC GCCACCGAAA TGCCGAAGCG CGCAGCACTG
CTGGCCGGAT TAATTCGGGC GTTATAG
|
|---|
| Protein sequence | MPQRPSSDPR TSHRDLFAHL KDQQSAMQSM LRRIVEHESP SDDKPSCDAM AEMLAQDFGA
IGGRTKLHRD KITGNHLQVD FGGPRGAKPV LIVGHYDTVY PLGTLKQMPY RESKGRISGP
GVLDMKGGIV QIHGAIAALQ TQGGLPRPVT IILVSDEETG SESSRSITEK LAKQSAAAFV
CEPAAGTDGA LKTARKGVGD YLLRITGVAS HSGLDFEKGQ SAVLELARQI EKIAGFTDLK
RGTTVNPGVI RGGTRSNVIA ASAEAEIDVR VSTKRDVERV SKLFARLKPI NRRCSLALSG
GVNRPPMERT PGTAALFAQA QLIAAELSFS LAERMVGGGS DGNFTGAIVP TLDGLGAVGD
GAHAVHEYIF ATEMPKRAAL LAGLIRAL
|
|---|
| |