| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0204 |
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| Symbol | |
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| ID | 4069673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 216440 |
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| End bp | 217801 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637982204 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_589283 |
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| Protein GI | 94967235 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.209858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.343798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAA TTGCTGTGAC GTATGTCCAT TGGCTGGTTG CTGCTTCGAT CGCGACTTCC
GTTGTTGCCT CCTACGCAGC GTTCAGTTTT GCTGAGCGTG TCGCGGCGTC AGACCGTCAA
CGCTCCCTTG GATGGCTGAT TGCCGGCGCC TTCGCCATGG GACTCGGCAT CTGGTCGATG
CACTATCTCG GCATGCTCGC GGTACAACTG CCGGTGCCAG TCGTTTATCA CGTTCCTACG
GTAATCATTT CCTTGTTGCT CGCGGTTGCG GCCTCCGCAG CGGTGTTGTG GGTGGTGAGC
CGTGAGAGTC TTTCGGGGCG GGCGATCGTC TTGGGCAGCG TTGCCATGGG CGGCGGCATC
GGCGCGATGC ACTATACGGG TATGGCAGCA ATGCGTTCTT ATGCCATGCA TCGCTATAAC
CCGTCACTGG TTTTGCTCTC GCTTGTAATC GCAGTGGCTT TTTCCTGGAT GGCGTTGCGC
ATCACCTTCC TGCTTCGAAG GGAGCCGGGC GCCCATGAAC TGCGCCGCAT GGGCGGAGCG
GTCCTGATGG GCATTGGCAT CGCCTCGATG CACTACACCG CTATGTTTGC CGTGACATTC
GAACGGGGCA ACACAGAATT CTCCACCGTC CATACGGTTC CGGTGACCCA TATCGACCAG
TTGGGCATCG TCGTAATGGC TGGCATGGTT TTATTTGGCG CGCTCATTTC CGCATACTTC
GATCGGCAGA TGAGCCGTGA CCTGCGCGTC TCGAATGAGC GACTGGCTGA GATGCAGGTG
GCGCTTCTTC AGAGAGAGAA AGAACTGAAG GAGGCGGTGG CCAAGCTGGA AGAGTTGTCG
ACCCGCGACG GATTAACGGG TTTGTACAAC CGCAGATTTT TCGATACGAC CCTGACAGCC
GAGTGCAAAC GCGCCGCACG TGCCAACTAT CCAATTAGCC TTTTGATTAT TGATGTTGAC
TGCTTCAAAG CACTCAACGA CCACTACGGC CATCTCGTGG GAGACGACTG CCTTCAGAAG
GTGGGAAAGA GCTTGGCGAG TGCGGTTCGG CGCACCTCGG ATGTAGTGGC GCGATACGGA
GGAGAAGAGT TTGCCCTCAT CCTCCCCAAT ACCAGCGAGG AGAGCGCCAC AACCATCGGA
GAAAATATTC GCCGTGCAGT TCTCGGCCTG GAGATCGCAA ACGCCAACTC CACTGCGGGC
CCCTTCGTTA CTCTGAGCGT AGGTGTATGC ACGCGTCGCC CTAGTCATCC TCGATCAAGC
GAGGATATTC TCGTGACGAC CAATGAGATT ATCCGCGCGG CGGATGAGGC GCTGTATCGA
GCGAAACGCG AAGGACGGAA TCGAGTGCTG CTGGGGGCTT GA
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| Protein sequence | MDTIAVTYVH WLVAASIATS VVASYAAFSF AERVAASDRQ RSLGWLIAGA FAMGLGIWSM
HYLGMLAVQL PVPVVYHVPT VIISLLLAVA ASAAVLWVVS RESLSGRAIV LGSVAMGGGI
GAMHYTGMAA MRSYAMHRYN PSLVLLSLVI AVAFSWMALR ITFLLRREPG AHELRRMGGA
VLMGIGIASM HYTAMFAVTF ERGNTEFSTV HTVPVTHIDQ LGIVVMAGMV LFGALISAYF
DRQMSRDLRV SNERLAEMQV ALLQREKELK EAVAKLEELS TRDGLTGLYN RRFFDTTLTA
ECKRAARANY PISLLIIDVD CFKALNDHYG HLVGDDCLQK VGKSLASAVR RTSDVVARYG
GEEFALILPN TSEESATTIG ENIRRAVLGL EIANANSTAG PFVTLSVGVC TRRPSHPRSS
EDILVTTNEI IRAADEALYR AKREGRNRVL LGA
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