| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0147 |
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| Symbol | |
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| ID | 4069732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 156415 |
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| End bp | 157629 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637982147 |
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| Product | protein translocase subunit secF |
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| Protein accession | YP_589226 |
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| Protein GI | 94967178 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000009249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00252765 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAACTGT TCCGCAATAC AAACATCGAT TTCCTTGGCA AGAAGTGGTA CTTCCTTGCG
TTCTCGTTAG TCTTCAGCGT AGCTGGCCTT ATCTCGATGG GCGCACGCTA CGCCAAGACA
GGCACGGCCG TTCCGCTCGG CGTGGATTTC AAGGGCGGCA CGCTGGTCTA CGTGAAGTTC
GCGCAGACTC CGAACCTTGG CGACATTCGC GCAGCGATGG ACCGCTCCGG TCTGAAGGAC
CCGAAGATCC AGACCTATGG GGGCCCTGCC AACAACGAAG TTCTGATCGC GCTCGAACAA
AAGGAAACCA GCGAGCAGGC ACTCGACGCC GGGAAGAACA CGATTATCAA GGCGCTCGAA
ACGAACCCCG CGTCGGGCAA GAACGATCTC AATAACGTGG GCTCCACGAC GATCCGTGAT
TACCTGATGA GCAAGGATCC GTTGCACGAG GTGGTGGATC CGGGTGCGAA GTACCAGCAG
ATCGCGTCGC AAATTGTTGA CTATCGTGAC AAGGAGCGGG GCGGAGTTCT GAGTTCGGTG
GATGAGCTGC AGGGTCATGT TCCTGCTGAC GTGGTGAATG CGCTGAAGAC GGACTACTTC
ACCTCTGGAT TTGGCGTCCG GAACGTGGAA ATCGTTGGGC CCCAGGTCGG TAAGCAGCTG
AGCAATCAGG CGCTTCTGGC AACCTTATAT TCGCTCGGCG GCATGCTGGT GTATCTCTGG
TTCCGATTTG AGCTGATTTA TGGCATCGGC GCAGTGGTTG CCTGCTTCCA CGACACGATC
ATTACTGTAG GTGCTTTCTC CTTGCTCAAC CGGGACATTT CCCTTACAGT GGTCGCCGCG
ATTCTCACCC TGATCGGTTA CTCCATGAAC GACACGATCG TCGTTTATGA CCGTATCCGG
GAGAACATTA AGTTACTCCG TCGCGAGTCT CTCGCCGATA TTGTCAATAA GAGCATTAAC
CAGACCCTTA GCCGAACCAT CCTGACATCT GGGCTGACGT TCCTGACGGT GCTCTCGTTG
TACGTATTTG GCGGGGAAGT ATTGAGAGGC TTCTCTCTTG CCCTGGTAAT CGGCATCCTA
ATTGGAACGT ATTCCTCGAT CGCGGTCGCC GCGCCAATGC TGGTTGCTTA CCAGGAGTGG
CGGGGACACC GCGGGACGGC AGCCCTACCC GGGCCGGCGC CTCGGAAAAA CGATCGAGTT
AAGGTGAAGG CCTAA
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| Protein sequence | MELFRNTNID FLGKKWYFLA FSLVFSVAGL ISMGARYAKT GTAVPLGVDF KGGTLVYVKF
AQTPNLGDIR AAMDRSGLKD PKIQTYGGPA NNEVLIALEQ KETSEQALDA GKNTIIKALE
TNPASGKNDL NNVGSTTIRD YLMSKDPLHE VVDPGAKYQQ IASQIVDYRD KERGGVLSSV
DELQGHVPAD VVNALKTDYF TSGFGVRNVE IVGPQVGKQL SNQALLATLY SLGGMLVYLW
FRFELIYGIG AVVACFHDTI ITVGAFSLLN RDISLTVVAA ILTLIGYSMN DTIVVYDRIR
ENIKLLRRES LADIVNKSIN QTLSRTILTS GLTFLTVLSL YVFGGEVLRG FSLALVIGIL
IGTYSSIAVA APMLVAYQEW RGHRGTAALP GPAPRKNDRV KVKA
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