| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0101 |
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| Symbol | |
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| ID | 4069476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 105618 |
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| End bp | 108044 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637982101 |
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| Product | ABC efflux pump, inner membrane subunit |
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| Protein accession | YP_589180 |
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| Protein GI | 94967132 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.965673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGAC TGCTCCAGGA ACTGCGCTTT GCGCTCCGCC AAATCCGGAA GTCACCGGGA
TTTTCGCTCG CGGTTGTGCT GACGATGGCC ATTGGTATTG GCATGAGCAC CGCGATGTTC
ACGGTGATGG ATGCGGTGGT GCTGCGTCCG CTGGCTGTTC CCGACATGGA GCGCGTGGCG
AGTGTCTCCG AGGAGAGTAC CGACCACATT GCGCGCGCGG ACGCGATGGG CAACGTGCAG
GATTGGTACA CGCAGAGCCA TTCGTTTTCT GAGATGGCGT GGCACCGTCC CGTGGCAATG
AACATGACCG GCGCCGGCGA TCCCGAACAA TTGATGGCGA CGTTGTCGTC CGCCAATTTG
TTCGACTTGC TCCGGGTGAA GCCGTGGCTG GGACGGACCT TCGCGAAGGG CGAGGATGAA
CCCGGCGCCG ATCGCGTGGC GGTGCTCAGC TACTCGCTGT GGCAGAAGCA ATTCGGGGAA
GACCGCAACG CTGTCGGTCG CAAAATCCAG CTCGATGGCA AGGAGTACGA CGTCATCGGC
GTGATGCCGC AGGGATTCCG CTACGCCTCG TACAGCGACA TTTTCATTCC TCTCGGGCTG
ACGCCGGCGG AAAAAGCGGA CCGTGCGGGA CATCTTTATA GCGTGCTTGC CCGTTTGAAT
CCGGGCGTGA CTCGCGAGGC CGCGCTGGCG GAGTTGTCGG CGATTGCTGC GCACGACGCT
AAGGAGCATC CCGAGACCAA CCTCGGTTGG GGCCTGAAAC TGCGCACGCT GGCCGACTCG
GTGAATGACG ATTACACGCC GATGTACATG CGGCTGATGC TCGGCGTGGG AATCTTCGTA
TTGCTGATCA TCTGCGCCAA CGTTTCGAAC CTGCAGTTCG CGCGCAGCAT CGGTCGCCGG
ACGGAGATTG CGATTCGCTC TGCGATGGGC GCCGGACGAA CCCGCATCGT GCGGCAACTG
CTTATCGAAA GCACCCTGCT CTGCGTTACG GGTGCGCTGG CTGGAATCCT GGTGGCGCGT
CTGCAACTGC ACCTTACGTT GATCACCATG CCTCCGCGGG TGGCACGCTT CCTGCCGGGA
TGGAGCAATA TCAATTTGAA TGGCCGGGCG CTGGCGTATT CGCTGGGCCT CGCGGTATTT
GCCGGGATCT TCTCCGGATT GGCGCCGAGT CTTTCCGCGT TACGCTTGGG CGTGGCAGAG
CAGTTAAAAG CCGGTGGACG CACCGTAGCG GGCGATCGGC GCTCGCATGC GTTGCGTAAC
ATCTTCGCAG TGGCGCAGAT CACGCTAGCT GTTGCGCTGG TTGCGGGAGC GGCGCTGATG
GGCTCGGGCA TGCGTGCAAT GCTGCGCCAA ACCGACCGCT ATTCGCCGAA GACGCTATTG
ACCTTTGAAG TGAACCTGCC GCACGCGCGC TACGCGACCG CCGCGCAGCA AAAGGCTTTC
TACGATGAGT CGTTGCAGGC GCTGCGGAAC ACGCCGGGCG TGGCATCGGC CGACATCACC
CCGACGTTCC CGGTCAACAA TACGGGCGTG TGGTGGCAGG ACGTCAACCT CGAGCATGTG
CAGGCGGTGC CGGGAGAATC GCGCGCTACA CAGCGGCTAA CCATCTCGCC GAGTTTCCTC
AGCGCAATGC ATGTCTCGCT GCTCGAGGGA CGCTGGCTCA ACGACTCCGA TGGAACTTCG
ACTACGCCGG TAGCAGTGAT CAGCAAGAAG TTCGCAGACC GATATTTCGA GGGGAAAGAT
CCGATCGGTC GCCGGATGCA ACTTGGCAAG CCCTCGGAAG CGACCCCGTG GATCACCGTC
GTGGGCGTAG CCGAGGACAT TACCTGGCTC TGGGTGGACA AGACGCCGCA ACCCACGGTG
TACCTGTCGT ACGCGCAATT CCCGGGCGAC AAGACGTACT TCGCAGTCCG CGCTAACGGC
GATGCCGACT CCATAGCGCC CGCCGTCCGC CGGGCATTCG CACAGATTGA CGCCACGCTG
CCTCTGAGCG ACGTCCAGAG CTACGACGTT TACCTGCATG AAACGCTGGT AGGACTCGAA
TATGTCGTAG GCATGTTCGT CATCGACGCG CTGGTGGCGC TGCTGTTGGC CGCGATCGGG
ATCTTCGGCG TGATGGCGAA TTCCGTCTCC GAGCGCACTC ACGAAATCGG CGTGCGCATG
GCGATGGGCG CGCAACCGAA ACAGATTCGC ATCCTGGTGC TGCGGCGTGC CGCGGTGCTG
ACGATCGTTG GATTGGCCCT GGGCATTCCC ATGGCAGGTG GACTCGCGCG GATGATGGCG
AATTTGATCT TCGGCGTCAG CGCGGGCGAC CTGCGCGTGT TCGTCGGGAC CGCCGGAGCG
GTGACGCTGG TAGCGCTGCT GGCTACGTTG TTGCCGGCAC ACCGAGCAAC GTCGGTGCAG
CCGATGACGG CGCTGAGGAA CGAGTAG
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| Protein sequence | MHGLLQELRF ALRQIRKSPG FSLAVVLTMA IGIGMSTAMF TVMDAVVLRP LAVPDMERVA
SVSEESTDHI ARADAMGNVQ DWYTQSHSFS EMAWHRPVAM NMTGAGDPEQ LMATLSSANL
FDLLRVKPWL GRTFAKGEDE PGADRVAVLS YSLWQKQFGE DRNAVGRKIQ LDGKEYDVIG
VMPQGFRYAS YSDIFIPLGL TPAEKADRAG HLYSVLARLN PGVTREAALA ELSAIAAHDA
KEHPETNLGW GLKLRTLADS VNDDYTPMYM RLMLGVGIFV LLIICANVSN LQFARSIGRR
TEIAIRSAMG AGRTRIVRQL LIESTLLCVT GALAGILVAR LQLHLTLITM PPRVARFLPG
WSNINLNGRA LAYSLGLAVF AGIFSGLAPS LSALRLGVAE QLKAGGRTVA GDRRSHALRN
IFAVAQITLA VALVAGAALM GSGMRAMLRQ TDRYSPKTLL TFEVNLPHAR YATAAQQKAF
YDESLQALRN TPGVASADIT PTFPVNNTGV WWQDVNLEHV QAVPGESRAT QRLTISPSFL
SAMHVSLLEG RWLNDSDGTS TTPVAVISKK FADRYFEGKD PIGRRMQLGK PSEATPWITV
VGVAEDITWL WVDKTPQPTV YLSYAQFPGD KTYFAVRANG DADSIAPAVR RAFAQIDATL
PLSDVQSYDV YLHETLVGLE YVVGMFVIDA LVALLLAAIG IFGVMANSVS ERTHEIGVRM
AMGAQPKQIR ILVLRRAAVL TIVGLALGIP MAGGLARMMA NLIFGVSAGD LRVFVGTAGA
VTLVALLATL LPAHRATSVQ PMTALRNE
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