Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0093 |
Symbol | |
ID | 4069717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 94286 |
End bp | 94981 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637982093 |
Product | ThiJ/PfpI |
Protein accession | YP_589172 |
Protein GI | 94967124 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTC TGCAGGTACT CACCTCGCAC GATCAGCTCG GCAATACCGG ACGTAAAACC GGCTTCTGGC TGGAAGAAGG TGCGGCCCCT TACTTCGTCT TCAGAGATGC CGGTGTCGAG ATCACCCTCG CTTCTCCCAA AGGCGGCCAG CCTCCCATCG ATCCCAAGAG CGACCTCGCC GAAAACCAGA CCGCCGCCCA GGTCCGCTTC AAGAAAGACG CACAAGCTCT CAAGGCCTTT GCCAACACCT TCAAGCTCGC CGACATGAAG GCCGAAGACT TCGACACCGT CTTCTATACC GGCGGCCACG GCCCCATGTG GGACCTCGCC GAGGACCCCG TCTCCATCGC CCTTCTCGAA ACCTTCTATA ACTCCGGTAA ACCGATCGCG CTCGTCTGCC ATTCCCCCGG CGTTTTACGC CACGTGAAAT ACAAGGGCGA GCCGCTGGTG AAAGGGAAGC ACGTGACCGG CTTCACCAAT GGCGAGGAAA CAGACGTACA GCTCACTAAG GTCGTGCCCT TCCTCGTCGA GGACGAACTG CTTCGTCTCG GCGCCATCTT CGAGAAGAAG GCCAACTGGC AACCGTTCAC CATCACGGAT GGCCGCCTCA TCACCGGCCA GAATCCGGCA TCGTCCACCA TTACCGCGCA AGCCCTCATG AGCTTTGTTG GCAAAACGAA GGAAGTAGCG GCGTAG
|
Protein sequence | MKILQVLTSH DQLGNTGRKT GFWLEEGAAP YFVFRDAGVE ITLASPKGGQ PPIDPKSDLA ENQTAAQVRF KKDAQALKAF ANTFKLADMK AEDFDTVFYT GGHGPMWDLA EDPVSIALLE TFYNSGKPIA LVCHSPGVLR HVKYKGEPLV KGKHVTGFTN GEETDVQLTK VVPFLVEDEL LRLGAIFEKK ANWQPFTITD GRLITGQNPA SSTITAQALM SFVGKTKEVA A
|
| |