| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_0085 |
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| Symbol | lpxC |
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| ID | 4069709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 85870 |
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| End bp | 86748 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637982085 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_589164 |
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| Protein GI | 94967116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTGTC ACGGCGTAGG TCTGCATAGC GGCGCGCCCG TGCGTCTGCG GCTTCTCCCG
GCATCGACTG GCGAAGGCAT CGTCTTCCGC CGTACAGATC TCGACGACTT CGAGATCGAG
GCCACCGGCC GCAACGTCGC GAAAGTCAGC TACGCCACCA GTCTGATGAA GAAGGGCGTG
CTGATCTCCA CCACCGAGCA TTTGCTCTCG GCCCTCATCG GCATGGGCGT GGACAACGCC
ATCATCGAAA TCGACAACCT GGAGCTGCCC ATCCTCGATG GCAGCGCCCA GCCCTTCGTC
GACATGATCG TTAACGCCGG ATTGCGCAAG CAGCGCCGCA AGCGGTCCTA TATCCGAATC
GTGAAGCCAA TCGAGTTGCG CGAGGGCGAC AAGTTTATCG CCGTCTACCC GTATGACGGC
TACTCCGTGA GCTATGCCAT CAACTTCCCT CATCCGTCGA TCGGTCGCGA GCGTTTTGAA
GTCGAACTCT CGAACGGAAA TTTTTTGCGC GAGATCGCGC CGGCAAGGAC CTTCGGTTTC
CTCCGCGATC GCGATGCGAT GCTGAACATG GGACTGATCC GTGGCGCGTC CGAAGAAAAC
GCAATCGTGT TGACCGACGA TGGCATCAAG AACGGACCGC TTCGCTATCC CGATGAATTT
GTCCGGCACA AGGTTCTTGA CCTGATTGGC GATCTGGCTC TCCTCGGGCG TCGCCTGCTG
GGACGCATCG TTGCCGACCG CGCCGGTCAT GCCATGCACA CCGCGCTCGT CACAAGAATT
CTGCGCGATC AATCGTTCTG GGAAGAGTCC ACGCTGAACG ATGAGCTGCC CGACATGCCG
GATTTCAGCG GCGCCCATCC TGTCGCCGAC CAGCTCTAG
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| Protein sequence | MECHGVGLHS GAPVRLRLLP ASTGEGIVFR RTDLDDFEIE ATGRNVAKVS YATSLMKKGV
LISTTEHLLS ALIGMGVDNA IIEIDNLELP ILDGSAQPFV DMIVNAGLRK QRRKRSYIRI
VKPIELREGD KFIAVYPYDG YSVSYAINFP HPSIGRERFE VELSNGNFLR EIAPARTFGF
LRDRDAMLNM GLIRGASEEN AIVLTDDGIK NGPLRYPDEF VRHKVLDLIG DLALLGRRLL
GRIVADRAGH AMHTALVTRI LRDQSFWEES TLNDELPDMP DFSGAHPVAD QL
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