Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0042 |
Symbol | |
ID | 4069976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 38797 |
End bp | 39456 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637982042 |
Product | methyltransferase GidB |
Protein accession | YP_589121 |
Protein GI | 94967073 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACGCA ACTTTCGAGA AAGGAAAATG CCGGGCGTGG AGATTGCGCG TATTGCTGAG TTGCTGGACC CCATCGTGGT CGCCGAGCGA CAGCTTGAGC AGATCTCCGT CTATTTAGAT CTGCTGCTGA AGTGGAACGC GCGCATGAAC CTGACGGCGG TACGCGATCC CGAACAAATC GTATTGCGAC ATTTTGGCGA ATCGCTGTTC GCGGCCCGCG AACTGTTCCC TGACCCGGAC GCGACAGGAT CCCTGGTGGA TGTAGGGTCC GGCGCCGGAT TTCCCGGAGT GCCGATCGCG ATCGAGCGCC CAGGGCTGAG CGTGACCTTG ATCGAGGCCC ATGGCAAGAA AGCCACGTTC CTCAAAGAAG TAGTGCGTTC CACGAGACTC ACCAATGCCT CTGTACAGGC GATCCGGGCA GAGGAATACG TGGGGGTGGC AGATGTGGTT ACCATGCGCG CGGTGGAAGA ATTTGCGTCA ATTCTCCCGG TTTCAGCAAG ACTCGTGCGC CCCGGCGGAC GGCTTGCCTG CCTTCTAGGA TCTCCGCAAG CTGCTGAGGC AGAAGGTGTT ATAGGAGAGT GCTGGCGGAC GGAACGAACT GTTTACTTTC CTGGTTCCAC CCAGCGAGTG CTGTGGATTG GGCAGCGAGC TCAGAAATAG
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Protein sequence | MTRNFRERKM PGVEIARIAE LLDPIVVAER QLEQISVYLD LLLKWNARMN LTAVRDPEQI VLRHFGESLF AARELFPDPD ATGSLVDVGS GAGFPGVPIA IERPGLSVTL IEAHGKKATF LKEVVRSTRL TNASVQAIRA EEYVGVADVV TMRAVEEFAS ILPVSARLVR PGGRLACLLG SPQAAEAEGV IGECWRTERT VYFPGSTQRV LWIGQRAQK
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