Gene Acid345_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0042 
Symbol 
ID4069976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp38797 
End bp39456 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID637982042 
Productmethyltransferase GidB 
Protein accessionYP_589121 
Protein GI94967073 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 
TIGRFAM ID[TIGR00138] 16S rRNA methyltransferase GidB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACGCA ACTTTCGAGA AAGGAAAATG CCGGGCGTGG AGATTGCGCG TATTGCTGAG 
TTGCTGGACC CCATCGTGGT CGCCGAGCGA CAGCTTGAGC AGATCTCCGT CTATTTAGAT
CTGCTGCTGA AGTGGAACGC GCGCATGAAC CTGACGGCGG TACGCGATCC CGAACAAATC
GTATTGCGAC ATTTTGGCGA ATCGCTGTTC GCGGCCCGCG AACTGTTCCC TGACCCGGAC
GCGACAGGAT CCCTGGTGGA TGTAGGGTCC GGCGCCGGAT TTCCCGGAGT GCCGATCGCG
ATCGAGCGCC CAGGGCTGAG CGTGACCTTG ATCGAGGCCC ATGGCAAGAA AGCCACGTTC
CTCAAAGAAG TAGTGCGTTC CACGAGACTC ACCAATGCCT CTGTACAGGC GATCCGGGCA
GAGGAATACG TGGGGGTGGC AGATGTGGTT ACCATGCGCG CGGTGGAAGA ATTTGCGTCA
ATTCTCCCGG TTTCAGCAAG ACTCGTGCGC CCCGGCGGAC GGCTTGCCTG CCTTCTAGGA
TCTCCGCAAG CTGCTGAGGC AGAAGGTGTT ATAGGAGAGT GCTGGCGGAC GGAACGAACT
GTTTACTTTC CTGGTTCCAC CCAGCGAGTG CTGTGGATTG GGCAGCGAGC TCAGAAATAG
 
Protein sequence
MTRNFRERKM PGVEIARIAE LLDPIVVAER QLEQISVYLD LLLKWNARMN LTAVRDPEQI 
VLRHFGESLF AARELFPDPD ATGSLVDVGS GAGFPGVPIA IERPGLSVTL IEAHGKKATF
LKEVVRSTRL TNASVQAIRA EEYVGVADVV TMRAVEEFAS ILPVSARLVR PGGRLACLLG
SPQAAEAEGV IGECWRTERT VYFPGSTQRV LWIGQRAQK