Gene Acid345_0022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_0022 
Symbol 
ID4071727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp23235 
End bp23726 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID637982022 
ProductIojap-related protein 
Protein accessionYP_589101 
Protein GI94967053 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.853245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT CTGAAAGTCG TAAAGCTGTT GCACTTGCGG TTTCTGCCGC ACAGGAGAAA 
AAGGCGGAGA ACATCGCTAT TCTTGAGCTC GATAAGAGCT CGAGCGGGTT TACCGATTAT
TTCGTTATCT GCACCGGTAG CAACCCGCGG CAGCTACAAG CCATCTCCGA TGAGGTAGAC
CAGAAGCTCT CCTCGATTGG TCAGGAGCCC CGGCACGTGG AGGGCTATAA CCAGGCGGAG
TGGGTGCTGA TGGACTATGT GGATTTCGTC GTCCACATTT TCAGCGAGAA CGCGCGCAAG
TTTTACGACC TGGAGCGGCT GTGGAAGTCC GCCAAACATC TTTCCCCGGA AGACCTGAGC
AAGCCCTCGG AACGGACCCC GGCCAAATCG CGACCGGCAG CCAAGAAAAC GGCGGTACGC
AAGAGCGCGC CAGCAGTAAA GAAGCCGCGC AAGACCGCCG CGAAGAAAGC GACCAAGCGC
ACCCGCGGTT GA
 
Protein sequence
MSKSESRKAV ALAVSAAQEK KAENIAILEL DKSSSGFTDY FVICTGSNPR QLQAISDEVD 
QKLSSIGQEP RHVEGYNQAE WVLMDYVDFV VHIFSENARK FYDLERLWKS AKHLSPEDLS
KPSERTPAKS RPAAKKTAVR KSAPAVKKPR KTAAKKATKR TRG