Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0002 |
Symbol | |
ID | 4070012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 1811 |
End bp | 2926 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637982002 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_589081 |
Protein GI | 94967033 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000194465 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0534413 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATTA CGGTCAGCAA GTTCGATCTG CTCAAGGAAC TCACCGCGAC GCAAGGCGTC GTCGAGCGCA AGACCACCAT TCCCATCCTT TCCAATTTTC TCTTCGAAGC CGTCGGCGAC AAGCTGAACA TCACTGCGAC CGATCTTGAT CTCAGTCTTC GGACCGCTTG TGTAACGAAG GTGAAGAAAG AGGGATCCTG CACCATTCCG GCGCGCAAAC TCTACGACTA CGTGAAGCTG CTTCCCGATG GCGACATCAC GATCAAGTTG CTGGAGAACC ACTGGGTCAA CATTCGTAGC GGACGCTCAA ACACCAAGAT GGTTGGCATG GCGCGCTCGA ACTTCCCCAG CTTGCCAGTG TTTCCGACGA CTGGGATGGT GAAGATTCCT GCCGCCGCGC TACGAACGAT GATTGGTAAG ACGATTTTCG CGATCTCCAA CGAAGAGTCG CGGTACACAT TGAATGGCGC GCTGATGGTG CTGAAACCAG AGTCGCTGAT CATGGTTTCG ACCGACGGCC ATCGCCTGGC CCATATCGAG CGCCAGGGTG GAAAGTTCGA AATCAGCGGC GAGATGAAAA CGCTGGTGCC GAAGAAGGCG ATGAGCGAGT TGTACTCGCT ATTACAGTCG ACCGAGACCG AAGACATCGA GTTCGCAAAG GACGAGAGCA CGCTGTTCTT CCGCATCGGC GGACGGTTGC TGACCTCGCG CCAACTCACC GGCCAATTCC CGAACTACGA AGCTGTGCTG CCGAAGGACA ACGACAAGTC GGTGACAATC CGGACCGATG AATTCATGGC GGCGATCCTG CGTGTAGCGC AATTTGCGGA CGAACGCTCG CAGGCAATTA AAGTTCGCCT GGAAAAGGAC GAGCTACGCA TCTCATCTTC ATCCACTGAA ACCGGCGAGT CGGAAGATTC GATCGTGACC GCGTATACGG GTGAGGTAGT GACCATCGGT TTCAATTCGC AATACTTGAT TGAGTTCCTG AAGGCCGCTG GTGCGGATGA GGTGAGACTC GAATTCAAGA ATGCGCAGTC GGCCGGCCAA TTGCGTCCGG AAGCAACGTC AGATGAGTTC AAGTATCGGT ATGTGGTAAT GCCGATGCGG ATCTGA
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Protein sequence | MEITVSKFDL LKELTATQGV VERKTTIPIL SNFLFEAVGD KLNITATDLD LSLRTACVTK VKKEGSCTIP ARKLYDYVKL LPDGDITIKL LENHWVNIRS GRSNTKMVGM ARSNFPSLPV FPTTGMVKIP AAALRTMIGK TIFAISNEES RYTLNGALMV LKPESLIMVS TDGHRLAHIE RQGGKFEISG EMKTLVPKKA MSELYSLLQS TETEDIEFAK DESTLFFRIG GRLLTSRQLT GQFPNYEAVL PKDNDKSVTI RTDEFMAAIL RVAQFADERS QAIKVRLEKD ELRISSSSTE TGESEDSIVT AYTGEVVTIG FNSQYLIEFL KAAGADEVRL EFKNAQSAGQ LRPEATSDEF KYRYVVMPMR I
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