| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0427 |
|---|
| Symbol | |
|---|
| ID | 4056611 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | - |
|---|
| Start bp | 443281 |
|---|
| End bp | 443814 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637981779 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_588868 |
|---|
| Protein GI | 94676524 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
|---|
| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAATAA TAGCAACATT ACTAAATAGT TGTTATATTC ATACTCCGCA AGATTTCGGA
TTTAATGAGC GGCTACCACT ACCTCCAAAA ATTGAATTAT TACCAATGGG ACCAAAACTA
AGTTCTATTG ACTGGGAAGT AAGTTTTTAT CCATTAATTA AACAAATGAG ATTAATTAAT
GAAGTAAAAG AAGATAGCAT ACTATTAGTT AATTTTATTA AAAATGATAC TAATAGTATT
TTACAGTCTG ATCAAGTTAC TGCTAAGCTT AGTAGCTTAG TTAATAAATG CAGTAATTTT
CGGGTGGTAA AAGCAGAAGT AATTCAAAGT GCACGTGTGC AATTAGGACT ATCAGATAAA
GACTGTTTAG AATCACRTAA TAAAGCAATT GAATTAGCTA GATATCTAAA TGCACAATAT
ATACTCTATT GCAGAGTAAG TGGTAATATT AAACAGCCTA ATTTAGAGAT ACAGTTAATG
CGTATACCAT CTGGAGAAAT AGTATGGTCA TGTCAGGGTA TTGCCCATAA ATAA
|
|---|
| Protein sequence | MIIIATLLNS CYIHTPQDFG FNERLPLPPK IELLPMGPKL SSIDWEVSFY PLIKQMRLIN
EVKEDSILLV NFIKNDTNSI LQSDQVTAKL SSLVNKCSNF RVVKAEVIQS ARVQLGLSDK
DCLESXNKAI ELARYLNAQY ILYCRVSGNI KQPNLEIQLM RIPSGEIVWS CQGIAHK
|
|---|
| |