Gene BCI_0416 details

Gene Information

• Locus tag: BCI_0416
• Symbol: def
• ID: 4056394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: -
• Start bp: 429204
• End bp: 429707
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 637981768
• Product: peptide deformylase
• Protein accession: YP_588858
• Protein GI: 94676503
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTAT TACCAATTTT GTATTACCCT GATCATCGTT TACGTCAAAT ATCTAAACCA 
GTGAATAAAA TTAATAATAG TATCTATCGT ATTGTATACG ATATGTTTGA TACTATGTAC 
CATAAAAATG GTATTGGTCT AGCTGCACCG CAAGTCAACA TTAACTTAAA TATTATTGTT 
ATTGATGTAT CAGAAAATAA AGAACAGCGT CTGGTACTTA TTAATCCTGA GTTATTAGCA 
AAAAGTGGTG AAACTGGTAT TCATGAAGGT TGTTTATCAA TACCAGAGCA ACATGGATTT 
GTTCCACGGG CAAAAAATAT CAAAGTACGA GCACTAGACT TAAATGGTAA TAGCTTTAAT 
TTAGAAACTA ATGATCTGCA GGCTATTTGT ATTCAACATG AAATGGATCA TCTAGTAGGT 
AAATTATTTA TTGATTACCT TTCACCGCTC AAACGTCAGC GTCTTTTGAA AAAAATGAAA 
CAATTAATAC GTAATCTAGA TTAA 

 

Protein sequence

MSLLPILYYP DHRLRQISKP VNKINNSIYR IVYDMFDTMY HKNGIGLAAP QVNINLNIIV 
IDVSENKEQR LVLINPELLA KSGETGIHEG CLSIPEQHGF VPRAKNIKVR ALDLNGNSFN 
LETNDLQAIC IQHEMDHLVG KLFIDYLSPL KRQRLLKKMK QLIRNLD