Gene BCI_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCI_0290 
SymbolprfA 
ID4056226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBaumannia cicadellinicola str. Hc (Homalodisca coagulata) 
KingdomBacteria 
Replicon accessionNC_007984 
Strand- 
Start bp310311 
End bp311411 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content40% 
IMG OID637981642 
Productpeptide chain release factor 1 
Protein accessionYP_588739 
Protein GI94676864 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.589593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTT CCATAATAAC TAAGTTAAAA GTATTACAAG AACGTTACTA TGAAGTCGAA 
ACTCTACTTG GGAACTCTGA AGTAGCAAAA GATCGGGAAC GTTTACGTAT ATTATCAAAA 
GAATATGCAC AACTTACTGA CATTCACACT TGTTTCCAAC ATTGGCAGCA AGTACAGGAA 
AATATTAGCA TTACCGGGCC GATGCTTGAA GACCCAGAAA TGCATGATAT GGTACAAGAT 
GAACTAAACA AGTTACATTC CTTACTATCA ACACTAGAAC AACAGTTACT AACATTGCTA 
CTGCAAAAAG ATTCCAATAA AGATCCAAAC GATGAACGTG GCTGTTTTAT TGAAGTACGT 
GCAGGTACTG GAGGAGATGA AGCTGCATTA TTTGCAGGAG ATTTATTTCG GATGTATAGT 
CGTTACGCAG AAATCCATAG TTGGCAAATC GATGTAATTA GCGCTAGTTC AGGACCTCAC 
GGTGGTTATA AAGAAATTAT AGTCAAGATG TCTCATGATA ACGCATATGG TCAACTTAAG 
TTTGAATCTG GTGGTCACCG TGTGCAACGG ATACCAGAAA CCGAATCACA GGGACGCATC 
CATACTTCCT CCTGCACCGT AGCAGTGATA CCAGATATTC TTCATGCGGA ATTACCAGAA 
ATTAGTCCTG AAGATATACG TGTTGATACC TTTCGTTCAT CAGGTGCAGG AGGACAGCAC 
GTAAATACTA CTGAGTCTGC TATTCGTATC ACCCATTTAC CTACTGGTTT AGTAGTTGAA 
TGCCAAGATG AACGTTCGCA ACATAAAAAT AAAGCTAAAG CTATGGCAGT ATTAAGTGCC 
CGCTTACGTG CTGCGGAAGC ACAATGCCGA CAGCAAGAAG AATCTTGTAT GCGCCGTAAT 
TTACTTGGTA GTGGTTATCG TTCAGATCGT ATCCGAACTT ATAATTTTCC GCAAGGACGG 
ATTACCGATC ACCGTATTGG TTTTACTACC TATCGACTAA ATGAAGTTAT AGAAGGGAAA 
CTAGAAATAT TACTACAGCC AATTATACAG GAGTATCAAA CAAATCAGCT GATAGCTTTA 
TCTGAATCCG AGATAACATG A
 
Protein sequence
MKPSIITKLK VLQERYYEVE TLLGNSEVAK DRERLRILSK EYAQLTDIHT CFQHWQQVQE 
NISITGPMLE DPEMHDMVQD ELNKLHSLLS TLEQQLLTLL LQKDSNKDPN DERGCFIEVR 
AGTGGDEAAL FAGDLFRMYS RYAEIHSWQI DVISASSGPH GGYKEIIVKM SHDNAYGQLK 
FESGGHRVQR IPETESQGRI HTSSCTVAVI PDILHAELPE ISPEDIRVDT FRSSGAGGQH 
VNTTESAIRI THLPTGLVVE CQDERSQHKN KAKAMAVLSA RLRAAEAQCR QQEESCMRRN 
LLGSGYRSDR IRTYNFPQGR ITDHRIGFTT YRLNEVIEGK LEILLQPIIQ EYQTNQLIAL 
SESEIT