Gene BCI_0281 details

Gene Information

• Locus tag: BCI_0281
• Symbol: rnc
• ID: 4056467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: -
• Start bp: 299551
• End bp: 300228
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637981633
• Product: ribonuclease III
• Protein accession: YP_588731
• Protein GI: 94676727
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTGCT TATTAAATAA TCTACAAAAG AAAATAGGTT ATTATTTTCA AAACCAGAAC 
TTATTATTAC AAGCTCTAAC ACACCGTAGT GCGAGTAATA AACATAATGA ACGTCTGGAA 
TTTCTAGGCG ACTCTATATT AAGTTATGTC ATAGCACATG CATTATATCA GCGTTTCCAG 
TATATTAATG AGGGAGACAT GAGTCGTATG CGTGCTACTT TAGTCAGAGG AAATACATTA 
GCTGAAATCG CTAGAGAGCT AAATTTAAGT ACGTGTTTAC GCTTAGGAAT AGGAGAGTTA 
AAGAGCGGTG GATTAAGCCG TGACTCAATA CTTGCAGATG CAGTTGAAGC TTTAATTGGT 
AGCATATTTC TAGATAGTAA TATTTTTACT GTAGAAAAAT TTATACTAAA CTTATACCGC 
AGTCGCTTAA ATAAAATTAT TCCCGGCGAG AGACAAAAAG ATCCAAAAAC TAGATTACAG 
GAATATCTAC AAGGACAGCA TATGCCTTTA CCTATATATA TAATAGTTCA AATTTCTGGT 
GAAACTCACG ATCAAAGATT TATTATCCAC TGCCAAGTAA ATAATCTAGC TAATCCCATT 
ATTGGTCATG GCTCTAGTCG TCGTCAAGCT GAGCAAGCTG CGGCACAGCA AGCTTTAAAG 
ATACTTAAAA TAGAATAA 

 

Protein sequence

MNCLLNNLQK KIGYYFQNQN LLLQALTHRS ASNKHNERLE FLGDSILSYV IAHALYQRFQ 
YINEGDMSRM RATLVRGNTL AEIARELNLS TCLRLGIGEL KSGGLSRDSI LADAVEALIG 
SIFLDSNIFT VEKFILNLYR SRLNKIIPGE RQKDPKTRLQ EYLQGQHMPL PIYIIVQISG 
ETHDQRFIIH CQVNNLANPI IGHGSSRRQA EQAAAQQALK ILKIE