| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0255 |
|---|
| Symbol | rpsA |
|---|
| ID | 4056582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | + |
|---|
| Start bp | 270342 |
|---|
| End bp | 272018 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637981607 |
|---|
| Product | 30S ribosomal protein S1 |
|---|
| Protein accession | YP_588705 |
|---|
| Protein GI | 94676844 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0539] Ribosomal protein S1 |
|---|
| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0579142 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAT CTTTTGCTCA ACTCTTTGAA GAATCTCTGA AAAACATCAC AACCCGCCCT
GGGTCTATTG TTCGTGGTAC GATTGTATCG ATAGCTAAAG ATATAGTTCT CGTTGATGCT
GGTCTAAAAT CGGAATCCGC TATTCCTATA GCGCAATTTT ATAATGCCCA GGGAGAACTA
GAAATAAAAG TCAATGATCA GGTTGACGTA GCGCTAGATG CCGTAGAAGA TGGTTTCGGA
GAAACTATAC TTTCTCGTGA CAAAGCTAAG CGTCATGAAG CTTGGTTAAT GCTAGAACAA
GCTTATGAAG AAGCTGCGAT CGTAACAGGA ATTATTAACA GTAAAGTTAA GGGTGGTTTT
ACTGTTGAGC TCAATGGTAT TAGAGCTTTC CTACCTGGTT CCTTAGTAGA TATGCGTCCA
GTTCGTGATA CATTACATCT GGAAGGCAAA GAGCTAGAGT TTAAAGTAAT TAAGTTAGAT
CAAAAACGTA ATAATGTTGT AGTGTCACGT CGTGCTGTTA TTGAGTCTGA AAATAGTTTT
GAACGAGATA ATTTGTTAGA AAATATGCAG GAAGGTATGG AAGTTAAGGG TCTCGTGAAG
AATCTGACTG ACTACGGTGC ATTTGTTGAT TTAGGAGGGG TAGACGGGCT ACTACATATT
ACTGATATGG CCTGGAAACG AGTTAAACAC CCTAGTGAAA TCGTTACTAT TGGTGATGAA
ATTATTGTTA AAATATTAAA ATTTGATCGA GAACGTACCC GTGTATCTCT AGGTTTAAAG
CAGCTTAGTC AAGATCCTTG GTATGCTATT GCTCAGCGTT ACCCAGAAAA TTCACGTCTT
ACTGGACGTG TTACGAATTT AACTGATTAT GGATGCTTTG TAGAAATAGA AGAAGGTGTT
GAAGGATTAG TACACGTGTC TGAAATGGAT TGGACCAATA AAAATGTTCA TCCATCGAAA
GTCGTTAATG TTAATGATAT TGTTGAAATT ATGGTACTTG ATATCGATGA AGAACGCCGT
CGTATTTCTC TCGGATTAAA ACAGTGTCAA GCAAATCCTT GGCAAAAATT TGCTGAAACA
CATGAGAAAG GTGATCGTGT TGAAGGTAAG ATTAAATCAA TTACTGATTT TGGTATTTTT
ATCGGTCTAG AAGGAGGTAT CGACGGCTTA GTTCATTTAT CTGATATTTA TTGGAATCTT
TCAGGTGAAG AGGCCGCACG TGAGTATAAA AAAGGAGAAG AAATTGCGGC AGTTGTTTTA
CAAGTTGATG CGGAGCGTGA GCGTATTTCC TTAGGTATTA AGCAATTAGA TCAAGATCCG
TTAAGTCACT ACTTGTCTTT AAATAAAAAG GGTGCTATTG TTAGCGGTAA AATAATTGCT
GTTGATGATA AAGGAGCTCT AATTCAATTA GCAAGTGGTG TTGAAGGTTA TCTACGTACG
TTTGATACTG ATTCTGTAGA GAGCAGAAGA GATAGTGCAA TGTTGCTTAA TATCGGCGAT
AATATCGAAG CTACATTGAT TGGAGTGGAT AGAAAAAATC GTTTTATTAA TTTATCTATT
CGTAATAAAG ACGAAGTTGA TGATAAAAAG GCGCTTAGTA CTGTAACTAC TAAGCAAGAA
GCAAATAATT TATCTAATGT TATGGTTGAA GCGTTTAAAG CAGCAACTAA AAGTTAG
|
|---|
| Protein sequence | MTKSFAQLFE ESLKNITTRP GSIVRGTIVS IAKDIVLVDA GLKSESAIPI AQFYNAQGEL
EIKVNDQVDV ALDAVEDGFG ETILSRDKAK RHEAWLMLEQ AYEEAAIVTG IINSKVKGGF
TVELNGIRAF LPGSLVDMRP VRDTLHLEGK ELEFKVIKLD QKRNNVVVSR RAVIESENSF
ERDNLLENMQ EGMEVKGLVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVTIGDE
IIVKILKFDR ERTRVSLGLK QLSQDPWYAI AQRYPENSRL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNVHPSK VVNVNDIVEI MVLDIDEERR RISLGLKQCQ ANPWQKFAET
HEKGDRVEGK IKSITDFGIF IGLEGGIDGL VHLSDIYWNL SGEEAAREYK KGEEIAAVVL
QVDAERERIS LGIKQLDQDP LSHYLSLNKK GAIVSGKIIA VDDKGALIQL ASGVEGYLRT
FDTDSVESRR DSAMLLNIGD NIEATLIGVD RKNRFINLSI RNKDEVDDKK ALSTVTTKQE
ANNLSNVMVE AFKAATKS
|
|---|
| |