| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0169 |
|---|
| Symbol | tpiA |
|---|
| ID | 4056146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | + |
|---|
| Start bp | 187374 |
|---|
| End bp | 188144 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637981523 |
|---|
| Product | triosephosphate isomerase |
|---|
| Protein accession | YP_588630 |
|---|
| Protein GI | 94676508 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACATC CGTTAGTTAT TGGTAACTGG AAACTAAACG GTAGTAAACA TATGGTTAGC
AATTTTATCA TATCACTCCG TAATCAATTA AGTAATATGA TTAACTGCTG CAACGTTGCT
ATAGCCCCAC CAATGATATA TTTGGACAGA GCTAAATCTT ATTTAACTGG TAGCCATATA
GCTCTAGGAG CGCAAAATGT TGATCTCCAT GTTTCTGGTG CATTTACTGG TGAAATTTCG
GCTAAGATGC TTAAAGATAT TGGCGCTAAA TATATTATTA TTGGCCATAT TGAACGTCGC
TTATACCATA AAGAAAGCAA TGAGGATATA GCTAATAAAT TTGCTTGCCT AAAAAATGAA
GGACTTATTC CTGTTTTATG TATTGGAGAA ACTAAAGAAG AGAATGAAAA AGATCAGACT
AAAGCTATTT GCGTCCGTCA GCTTGACTAT ATTCTCAATA TAGTAGGTAC TCAAGCGTTT
AAAAATGCAG TCATAGCCTA TGAGCCTATT TGGGCAATTG CTACCGGAAA ATCCGCTAAT
CCGTTACAGA TACAGAAAAT ACATAAATTT ATAAGAAGCT ATCTTTTCAA TCATGATCAG
GCTATAGCAG AGCAGGTTAT AATTCAATAC GGAGGATCAG TAAATGCTAG TAATGCAGCT
GAGCTGTTTA ACCAACCAGA TGTTGATGGC GCATTAGTTG GCGGTGCATC GCTGAAAGCT
GATATCTTTG CTACTATCAT TAAGGCAGCT GCACGAGCAA AAAAAAACTA A
|
|---|
| Protein sequence | MRHPLVIGNW KLNGSKHMVS NFIISLRNQL SNMINCCNVA IAPPMIYLDR AKSYLTGSHI
ALGAQNVDLH VSGAFTGEIS AKMLKDIGAK YIIIGHIERR LYHKESNEDI ANKFACLKNE
GLIPVLCIGE TKEENEKDQT KAICVRQLDY ILNIVGTQAF KNAVIAYEPI WAIATGKSAN
PLQIQKIHKF IRSYLFNHDQ AIAEQVIIQY GGSVNASNAA ELFNQPDVDG ALVGGASLKA
DIFATIIKAA ARAKKN
|
|---|
| |