| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0136 |
|---|
| Symbol | |
|---|
| ID | 4056658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | + |
|---|
| Start bp | 149343 |
|---|
| End bp | 150944 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 637981492 |
|---|
| Product | putative inner membrane protein translocase component YidC |
|---|
| Protein accession | YP_588605 |
|---|
| Protein GI | 94676570 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0706] Preprotein translocase subunit YidC |
|---|
| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.170147 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGC AACGTAATCT TCTTGTCATA GCTTTACTAT TTGTTTCTTA TATTATTTGG
GAAATATGGC AAAAAGAACA TTTTCCACAA AATAATATTC AAAATACTCT TATAGAAATA
AAAGATAACT TACCCCAACA GAACATACCA TACTACAAAA AAGGTAAACA CATCATAGTT
AAAACAGATG TTTTTTTGCT TACAATTAAT ACGTCAGGTG GTGATATTGA ACAAGCTTAT
CTACTAACAT ATCCGACTAA ATTAGGTTCC TCTAAACCGT TCTCTTTATT AGAGAAGAAG
CCAACATTCG TCTATCTAGC ACAAAGTGGT ATAATAGGTA AACATGGTAT AGATCAAAAA
GAACGTCCAC TATATAAAGC TAAACATAAA CAATATTTTT TAAACAATAA CGAAAATATA
CTATATGTAC CACTAACTTA TACATCAACT AATGGTATAG TATATACTAA AACTTTTGTG
TTTAAAAGAG GAGAGTTTGC AATAAATGTA AATTATAATA TTCAAAATAA TAGTAATAAA
CCTCTAGAAA TAAAATTATT TGGTCAATTC AAGCAATCTT TTAATTCTTC TGAATTTAGT
GATATTTATC GTAATAGTTT TTCTTTACAA ACTTATCGAG GTGCTGCGTA TTCAACTACA
AAATATAAAT ATAAAAAGTA TAGTTTTAAA GATATCCAAC AAACTAATTT AAATGTTAGT
AGTAAAAAAG GTTGGATAGC AATGTTACAG CAATATTTTG TTACTGCTTG GGTTCCCATT
ACTCAAGGTT ATAAAAATTT TTATACAACA AATTTAGAAA ATGGAGAAGT AGCTATTGGT
TTTCAATCTG AAGAAGTAAA TATTGCTCCA CATAAACAGG ATAACTTAAA TGCTATATTA
TGGTTAGGAC CTAAAATACA AGATAAAATG GCAGAAATAG ATCCTTACTT AGATTTAGCC
GTTGATTATG GTTTATTATG GTTTATCTCT AAGCCTTTAT TTAAATTACT TAAATTTATT
TATAGTATTA TTGGTAACTG GGGTTTTGCA ATCATTATTA TTACTTTTAT TGTACGTGGT
TTAATGTATC CATTAACAAA AGCTCAATAT ACTTCTATAG CTAAAATGAT GATATTACAG
CCAAAGCTAG CTGTAATACG TGAACGTTTT AGTGATAATC CACAACGTCA AAACCAAGAA
TTAATGGCAT TATACAAAGC AGAAAAAATT AACCCATTAG GAGGATGTCT GCCTCTAATT
ATCCAGATGC CTATATTTCT GGCATTATAT TATATGTTGT CAGGTTCTAT TGAACTACGT
CATGCTCCAT TTGCTTTATG GATTCAAGAT CTTTCTGCAC AAGATCCATA TTATATCTTA
CCCATTATAA TGGGTATTAC TATGTTAATT ATTCAAAAAA TATCCCCTAC TACTATTACT
GATCCTATAC AACAAAAGAT AATGAATTTT ATGCCTATTA TCTTTACTGT TTTTTTTCTA
TGGTTCCCAT CAGGTTTAGT ATTATATTAT ATAGTAAGTA ATTTATTTAC TATTATTCAA
CAAGAACTTA TTTATCGAGA GTTTAAAAAA CAAGTTAAAT GA
|
|---|
| Protein sequence | MDSQRNLLVI ALLFVSYIIW EIWQKEHFPQ NNIQNTLIEI KDNLPQQNIP YYKKGKHIIV
KTDVFLLTIN TSGGDIEQAY LLTYPTKLGS SKPFSLLEKK PTFVYLAQSG IIGKHGIDQK
ERPLYKAKHK QYFLNNNENI LYVPLTYTST NGIVYTKTFV FKRGEFAINV NYNIQNNSNK
PLEIKLFGQF KQSFNSSEFS DIYRNSFSLQ TYRGAAYSTT KYKYKKYSFK DIQQTNLNVS
SKKGWIAMLQ QYFVTAWVPI TQGYKNFYTT NLENGEVAIG FQSEEVNIAP HKQDNLNAIL
WLGPKIQDKM AEIDPYLDLA VDYGLLWFIS KPLFKLLKFI YSIIGNWGFA IIIITFIVRG
LMYPLTKAQY TSIAKMMILQ PKLAVIRERF SDNPQRQNQE LMALYKAEKI NPLGGCLPLI
IQMPIFLALY YMLSGSIELR HAPFALWIQD LSAQDPYYIL PIIMGITMLI IQKISPTTIT
DPIQQKIMNF MPIIFTVFFL WFPSGLVLYY IVSNLFTIIQ QELIYREFKK QVK
|
|---|
| |