| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0066 |
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| Symbol | ligA |
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| ID | 4056211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007984 |
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| Strand | - |
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| Start bp | 77544 |
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| End bp | 79559 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637981425 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_588544 |
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| Protein GI | 94676849 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA TAGAACAATA CATAGAGCAA TTACGTCAAC AGCTGCGTTA TTGGAATTTT
TTATATTATG CAAAAGATGC TCCAGAAGTA TCTGATGTAG AATATGATTG GTTAATGATG
AAACTGCGCG AACTAGAAAG ACAATGGCCA GATCTAAAAA CTGCAGATTC TCCTACACAA
CATATTGGTT ATAAGGCACA AAGTAAGTTC CGTAAGGTAA TCCATGAAGT TCCAATGCTA
TCACTAGATC ACATATTTAA CGATACTAGT TTCCTAGCTT TCGATCGTCG AATACGTAAT
AGACTTCAAT ATGGTAATAA CTACCTTACC TATTGCTGTG AACTTAAGTT TGATGGAATA
GCAGTTAGTT TGCTCTATAA GCATGGTAAA TTAATAAGAG CAGCAACTCG TGGGGATGGT
CATATAGGTG AGGATGTAAC GGATAATATC CGTACTATAT GTAGTATTCC GTTACAATTA
AAAGATGATG GTCATATTCC ACGATTAATT GAAATTCGTG GCGAAGTTAT TATGTCTGAA
GATGCTTTCC GACATTTAAA TGAAACAGCA AAAAAAAATA AAAGTAAAAG ATTTGCTAAT
CCTCGTAACG CAGCTGCCGG ATCACTACGA CAAGTAGATC CATCTATTAC CGCAACAAGA
CTACTAAGTT TTTTTTGCTA TGGAGTAGGA CGAATAGATA GCAAGAAAAT ACCAGCCGCT
CATTTGGAAT TATTACAGCA ATTTAAAATA TGGGGCTTAC CTGTAAGTAA TTACCGACGA
TATTGTGTTG GTCATCAAGA AGTTCTTGAT TTTTATAGTT ATGTATCTAA GGTTAGATCA
AAACTAGGTT TTAACATCGA TGGTATCGTA ATTAAGGTAA ATGCTTTAGT GCAACAACAG
CAACTAGGTT TTGTTGCTCG TGCTCCACGC TGGGCTATTG CTTATAAATT ACCTGCTAAT
GAACAACTAA CTGAAATACA AAATATAGAT TTTCAGGTAG GTCGTACTGG AATTATTACA
CCAGTAGCAA GATTAAAACC TGTTTATATC TCTGGTGCTT ATATTAGTAA TGCTAGTTTA
CATAGTTTTG CTGAAATTAA ACGCCTAGGA TTAAGGATCG GTGATACAGT TGTAATTCGT
CTTGCTGGTA ATATTATACC TCAGATTGTT AATGTAGTAG TCTCAAAAAG ATCCATAAAA
ACTAGTCCCG TTTTATATCC TCTATACTGT CCGGTATGTG GCTCTAAAGT TAAACAAAAT
AACAAAGAAA AAACTATTAT TTGCACCGCA GGTATGATCT GCAGTGCACA ACTCAAGGAA
GCACTGAAAC ACTTTGTTTC TCGCCGCGCC ATGAATATCT ACGGTATGGG CGGGAAAATC
ATAGATCAAT TAGTAGATCT AAAAATAATA CAAAACCCAG TTGATTTATT CCGACTAAAT
CAAGATCAAT TAACTTGTTT AAAAAATATG GGGCAAAAAA AAACAAAAAA GTTACTCGAT
GCTATCGAGT ATGCGAAAAA AACTACTTTT GCACGTTTTC TGTATGCAAT AGGTATTCGC
GAAATAGGGG AGACAAAAGC TGCTTATTTA GCCGATTATT ATAAACATAT CGATGCTTTG
ATGGCAGCAG ATATTGAATC ATTAACTAAA ATTCAAGATA TAGGAATTAT TGTAGCTACT
AACGTACTTA ACTTTTTCCA TAATAAACAT AATATCGCTA TAATAGAAGA ATTATGCAGT
CCTAAAATTG GAATTAAATT TTTATCTACG CTAGAGAAAA ATAATTATTT TTCTGGTAAA
AATATAGTGT TTACTGGTAC TTTAGCCTTC TTATCAAGGG AAGAAGCAAT CGATATGCTA
ATAGCATTAG GAGCAAGGAT TCGTAGTAGC GTATCTTCTA AAATAGATTT ATTAATCGCG
GGCAAAAATA CTGGTTTTAA GCTAACTAAA GCTAAACAAC TTCAGATTAA GATTATAGAA
GAAGCTGAAT TCTATCAAAT TTTAGGTATA CGTTAA
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| Protein sequence | MKQIEQYIEQ LRQQLRYWNF LYYAKDAPEV SDVEYDWLMM KLRELERQWP DLKTADSPTQ
HIGYKAQSKF RKVIHEVPML SLDHIFNDTS FLAFDRRIRN RLQYGNNYLT YCCELKFDGI
AVSLLYKHGK LIRAATRGDG HIGEDVTDNI RTICSIPLQL KDDGHIPRLI EIRGEVIMSE
DAFRHLNETA KKNKSKRFAN PRNAAAGSLR QVDPSITATR LLSFFCYGVG RIDSKKIPAA
HLELLQQFKI WGLPVSNYRR YCVGHQEVLD FYSYVSKVRS KLGFNIDGIV IKVNALVQQQ
QLGFVARAPR WAIAYKLPAN EQLTEIQNID FQVGRTGIIT PVARLKPVYI SGAYISNASL
HSFAEIKRLG LRIGDTVVIR LAGNIIPQIV NVVVSKRSIK TSPVLYPLYC PVCGSKVKQN
NKEKTIICTA GMICSAQLKE ALKHFVSRRA MNIYGMGGKI IDQLVDLKII QNPVDLFRLN
QDQLTCLKNM GQKKTKKLLD AIEYAKKTTF ARFLYAIGIR EIGETKAAYL ADYYKHIDAL
MAADIESLTK IQDIGIIVAT NVLNFFHNKH NIAIIEELCS PKIGIKFLST LEKNNYFSGK
NIVFTGTLAF LSREEAIDML IALGARIRSS VSSKIDLLIA GKNTGFKLTK AKQLQIKIIE
EAEFYQILGI R
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