Gene BCI_0047 details

Gene Information

• Locus tag: BCI_0047
• Symbol: mreD
• ID: 4056391
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: -
• Start bp: 56812
• End bp: 57288
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 637981406
• Product: rod shape-determining protein MreD
• Protein accession: YP_588525
• Protein GI: 94676500
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.684213
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACGAT TTTATCGTCA ATATAACTGG GTTATATGGT TATTCTTTTT TTTTATTATC 
ATCATATTAC CAATCATACC ATGTAACAAA CCTATTAATT TATTTTGGCC ATCTTGGCTC 
AATTTATTAC TAATTTATTG GGTTATGGTG CGACAAAATC GAATACATGT GGGAATAGTA 
TTTTTAATAA GTATTATTGT TGATTTGATA CGAGGATCAA AATTAGGTAT ACATCCTCTA 
TTAATTAGTA TAATTATATA TATAGTTTTT ATAAAAATTA AATTTTTTCG GAATAAAAAT 
ATTTATCAAC AAGTAATTAT TATAATATTG GCTTCAGCAA TTGCTAAATT CATAGTAAAT 
ATTACTAATT ATTTATTACT AAGTAATTCA TGGCAAACAG GAATTTTATC TAGTAGCATA 
GTAGATGGTA TAGCATGGCC TTTAGTTTTA TGTATTATGC GTAAAATCAC AAGCTAA 

 

Protein sequence

MTRFYRQYNW VIWLFFFFII IILPIIPCNK PINLFWPSWL NLLLIYWVMV RQNRIHVGIV 
FLISIIVDLI RGSKLGIHPL LISIIIYIVF IKIKFFRNKN IYQQVIIIIL ASAIAKFIVN 
ITNYLLLSNS WQTGILSSSI VDGIAWPLVL CIMRKITS