Gene BCI_0042 details

Gene Information

• Locus tag: BCI_0042
• Symbol: thiE
• ID: 4056568
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: +
• Start bp: 53213
• End bp: 53857
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637981401
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_588520
• Protein GI: 94676830
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGACCG ATAAATATTT AGATTTACCT AATCGACTTG GTCTCTATCC TATTATTGAT 
TCGTTGGTAT GGTTAGTACG TATGCTAGAT CTAGGAATCA CTACCATACA ATTAAGAATT 
AAAGATAAGA GTGAAGCTGA AGTTGAGCCA GATATTGAAG CTGCTATTGT ACTTGGAAGA 
CGATATAACG CACGGGTATT TATCAATGAC TACTGGCGTC TAGCTATCCG CCATAGTGCA 
TATGGTGTAC ATCTTGGGCA AGAAGATATT AATAAAGCTG ATATTCATGC TATTAATCAC 
GCAGGATTAT TCTGGGGAAT ATCAACTCAT AATGAAGAAG AGTTAATGCG TGCAATAACA 
TATGGTCCTT CTTACATTGC ACTAGGTCAT ATTTTCCCTA CTACTACTAA AATTATGCAT 
TCGCGTCCAC AAGGATTAAA AAACTTACGT AAGCTAGTAA CTAAATCTAG AAATTTACCT 
ACGGTAGCTA TAGGTGGAAT TAGTGCTACT AAAATTGATT CAGTTTTAGA ATGCGGTGTT 
GGTAGTATCG CTGTAGTAAG TGCAATAACA CGAGCACCTG ATTGGCATAA AGCTACCATC 
AATATACTGA ACAAAATTAA GCATTGGCAA TCTATTTATG CTTAA 

 

Protein sequence

MLTDKYLDLP NRLGLYPIID SLVWLVRMLD LGITTIQLRI KDKSEAEVEP DIEAAIVLGR 
RYNARVFIND YWRLAIRHSA YGVHLGQEDI NKADIHAINH AGLFWGISTH NEEELMRAIT 
YGPSYIALGH IFPTTTKIMH SRPQGLKNLR KLVTKSRNLP TVAIGGISAT KIDSVLECGV 
GSIAVVSAIT RAPDWHKATI NILNKIKHWQ SIYA