Gene BCI_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCI_0008 
SymbolispG 
ID4056151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBaumannia cicadellinicola str. Hc (Homalodisca coagulata) 
KingdomBacteria 
Replicon accessionNC_007984 
Strand+ 
Start bp10933 
End bp12054 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content35% 
IMG OID637981368 
Product1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 
Protein accessionYP_588487 
Protein GI94676513 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAATT TAGTTTCTAA TCGTCGTAAA TCCAAACGTA TTTATGTTGG CAATGTACCA 
ATAGGTGATG GTGCACCTAT TGCGGTGCAA TCTATGACTA ATACTCAAAC TACTAACGTT 
ATTGCTACAG TTAATCAGAT TAAAGCTTTA GAGCGTCTGG GCGCCGATAT TGTGCGTGTA 
TCTGTACCTA CTTTACATGC AGCTGAACAA TTTAAACTTA TCAAAGAACA AGTTGATGTT 
CCTTTAGTTG CTGATATTCA TTTTGATTAT CGTATCGCAT TAAAAGTAGC TAAGTATGGT 
GTAAATTGTC TACGTATTAA TCCTGGAAAT ATTGGTAATA AGAAACGCAT TAGATCAGTG 
GTTGATTGTG CTCGTGATCA TCATATCCCT ATTAGGATTG GAATTAATGC CGGTTCTTTA 
GAAAAAGATT TACAAAATAA ATATAGTAAA CCTACTCCTG AAGTATTATT AGAATCAGCT 
TTACGTCAGA TAGATATTCT AGATAGGCTA AATTTTGATC AATTCAAAGT TAGTGTAAAA 
GCTTCTGATG TATTATTAGC TGTTAGATCT TACCGTTTAC TTGCATCACA AATTGATCAA 
CCGTTACATA TTGGTATTAC TGAAGCTGGT GGTGCTCGTA GCGGTGCTGT TAAATCAGCT 
ATAGGAATAG GTTTATTACT AAGCGAAGGT ATCGGTGATA CTTTACGTGT TTCTTTAGCT 
TCTGATCCAA TAGAAGAAGT AAAAGTAGCA TTTGATATCC TAAAATCCCT ACGTATCCGT 
ACACGAGGTA TTAATTTTAT AGCATGTCCT ACCTGTTCTC GTCAGGAATT TGATGTAATT 
GGCACAGTCA AAGAATTAGA ACAACGATTA GAAGATATTG TTACACCAAT GGATATCTCT 
ATTATCGGTT GTATAGTAAA TGGTCTAGGT GAAGCACTAA TGTCCAATAT TGGTGTTACT 
GGTGGACCTC GTAACAGTAG TTTTTACGAA GATGGTATTC GACAACATCA CCGCTTCGAT 
AATAAATTTA TTATTGATCA GCTTGAAGCT CGTATTCGAG CTAAAGCTAT GATGCTGGAA 
GAGAACAATA AAATAACAGT AATTAATTTA CCGAAAAAAT AA
 
Protein sequence
MQNLVSNRRK SKRIYVGNVP IGDGAPIAVQ SMTNTQTTNV IATVNQIKAL ERLGADIVRV 
SVPTLHAAEQ FKLIKEQVDV PLVADIHFDY RIALKVAKYG VNCLRINPGN IGNKKRIRSV 
VDCARDHHIP IRIGINAGSL EKDLQNKYSK PTPEVLLESA LRQIDILDRL NFDQFKVSVK 
ASDVLLAVRS YRLLASQIDQ PLHIGITEAG GARSGAVKSA IGIGLLLSEG IGDTLRVSLA 
SDPIEEVKVA FDILKSLRIR TRGINFIACP TCSRQEFDVI GTVKELEQRL EDIVTPMDIS 
IIGCIVNGLG EALMSNIGVT GGPRNSSFYE DGIRQHHRFD NKFIIDQLEA RIRAKAMMLE 
ENNKITVINL PKK