| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5916 |
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| Symbol | |
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| ID | 4042780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 117300 |
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| End bp | 118160 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637981335 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_588044 |
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| Protein GI | 94314835 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.746301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTGGC TCGGCTGGAT TCGCTTCTTC GAAGCCGCCG CGCGTCACCA GAACTTCGCC
CGCGCGGCCG ACGAGTTGCA CCTGACCCAC GGCGCGATCA GTCGGCAGAT CCGCCAGCTT
GAAGCCGAAC TCGGCGTGAG CCTGTTCGAA CGGCGTAATC GCGCGGTCTT TCTGACCGAG
GCTGGCCGCA CTCTCCAGTC CGCGGCCACG CAGTCGATGG ACTTGCTTGC GGCGGCGGTC
GAGCGCATCC GCAAGCCCGC TGCGAACACC GCGCTGGTGT TGTCATGCGA GCCAACCATC
GCCATGCGCT GGCTGATTCC TCGGTTGGCA CGGTTTTCCG CTCGGCATCC CGATATCCCG
TTGCATCTGA TGGCTGCTGG CGGCGCGATC GACTTTGCGC GTAGCGGTGT CGACGTGGCA
TTGCGTCGCA ATGATTTCCC GTTCGATACG CGCTGGCACA CGCGGGAGGT GACGCCCGAG
CGGGTGGGGC CGGTTTGCCG GCCGGATCTG GCAGATCACG GGCTCGATGC AATGCCCTGG
CTGCATACGC GCACTAGACC CGATGCCTGG CAGCGCTGGG CGCGTAGCGC GGGGTATGTA
CTCACTGGCA GCACGGACGT CTGGTACGAG CACTTTTATC TAAGCCTGCA GGCCGCGTCC
GCCGGGCTGG GCTGGGCGAT TGCTTCGGAG CTGATGGCCT ATGACGAGTT GTCCGACGGT
CGCATGGCCG CACCCCGGGG CTTCGTGGCC GATGGCTCGG CGTACCATCT GCTTTCGCCT
GTGCCGTTCG AGCATGACTC GCGCCGGCTG GCGTTGTTCG ACTGGCTCCA TGCCGAGGCA
AACGCATCTT CACAGGCATA G
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| Protein sequence | MHWLGWIRFF EAAARHQNFA RAADELHLTH GAISRQIRQL EAELGVSLFE RRNRAVFLTE
AGRTLQSAAT QSMDLLAAAV ERIRKPAANT ALVLSCEPTI AMRWLIPRLA RFSARHPDIP
LHLMAAGGAI DFARSGVDVA LRRNDFPFDT RWHTREVTPE RVGPVCRPDL ADHGLDAMPW
LHTRTRPDAW QRWARSAGYV LTGSTDVWYE HFYLSLQAAS AGLGWAIASE LMAYDELSDG
RMAAPRGFVA DGSAYHLLSP VPFEHDSRRL ALFDWLHAEA NASSQA
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