| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5896 |
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| Symbol | |
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| ID | 4042760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 95489 |
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| End bp | 97189 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981315 |
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| Product | glycolate transporter |
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| Protein accession | YP_588024 |
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| Protein GI | 94314815 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1620] L-lactate permease |
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| TIGRFAM ID | [TIGR00795] L-lactate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0963775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCT GGACCCAGAT CTATACGCCG CTGGGCAGCC TCTGGCTGTC CGCGCTCGCG
GCGGCGATAC CCATCCTGTT TTTCTTCGTC GCACTCGCGG TACTGCGCAT GAAGGGCCAT
GTGGCGGCGG CCGTCACGCT GGCACTGGCG CTGGCTGTGG CGATCTTCGC GTACGGGATG
CCCGCGCAGC AGGCATTTGC CGCGGCCGGC TTCGGCTTTG CCTATGGCCT GTGGCCAATC
GCGTGGATCA TCGTCACCGC GGTGTTCCTC TACAAGATCG TGGTCAAGAC CGGGCAGTTC
GACGTCATCC GCGCGTCGGT GCTGTCGATC ACCGATGACC AGCGCCTGCA GATGCTGCTG
ATCGGCTTTG CCTTCGGGGC GTTCCTGGAA GGTGCGGCGG GCTTCGGCGC ACCGGTGGCG
ATTACCGCCG CGCTGCTGGT CGGGCTCGGG TTCAACCCGC TCTATGCGGC CGGGCTCTGC
CTGATCGCGA ACACCGCGCC GGTGGCGTTT GGCGCGATGG GCATTCCGAT CATCGTGGCC
GGACAGGTCA CGGGCATCGA CCCGATGCAT ATCGGCGCGA TGGCGGGCCG CCAATTGCCG
CTGCTGTCGC TGGCCGTGCC GTTCTGGCTG GTGTTCATGA TGGATGGCGC CAAGGGCGTG
CGCGAGACCT GGCCCGCTGC GCTGGTCGTC GGTGGCAGCT TCGCCGTCAC GCAGTACTTC
ACGTCGAACC ACATCGGGCC CGAGCTGCCG GACATCACGT CGGCACTGGT CAGTCTGATC
TCGCTCGCCG CGTTCCTGCG TGTGTGGCAA CCGCGCTCGG CATCGCAAGC GGCTGGTGGC
ACGGTTGCGG CCGGCGGCAC TGTGGCGATG GCCGGGTTCG GTGGCGGTAT GGGTGCGCCC
GCGAGCCGCA AAGCATCGCC CTACACGTTC GGCCAGACCG TGCGCGCATG GGCGCCGTTC
GGCATCCTGA CCGCCATCGT CACGGTCTGG AGCCTGGCAC CGTTCAAGGC ACTGTTCGCC
GGCAACGGCG CGCTGGCGGG AACGGTACTG AAGTTCAAGG TGCCGATGCT CGACCAGCTC
GTGATCAAGA GCGCCCCGAT CGTGGCATCG CCCAAGCCCT ATGAGGCCGT GCTGAAGCTC
GACCTGCTGT CGGCCGTCGG TACCGCGATC CTGCTGACCG CCATCATCTC GGCAGTGCTG
CTGCGCATGA AGCCGAGCGA TGCCATCACC ACCTTCAAGG AAACGCTGCT GGAACTGCGC
CGCCCGATCG CCTCGATCGG TCTGGTACTG GCGTTCGCGT TCGTCGCCAA CTACTCCGGT
ATGTCATCGA CGCTGGCGCT GCTGCTGGCC GGAACCGGCG CGGCGTTCCC GTTCTTCTCG
CCGCTGCTGG GCTGGCTGGG GGTGTTCCTG ACCGGCTCGG ATACGTCGTC GAACGCGCTG
TTCTGCTCGC TGCAGCATAC GACCGCGCAT CAGATCGGCG TATCGGACAC GCTGCTGGTG
GCCGCCAACA CCACGGGCGG CGTGACCGGC AAGATGATCT CGCCGCAATC GATCGCGGTG
GCTTGCGCGG CGACGGGTCT GGTCGGCAAG GAGTCAGAAC TGTTCCGCTT CACCGTGAAG
CACAGCCTGC TGTTCGCGGC GATCGTGGGT GTGATCACGA TGATCCAGGC GTACTGGCTG
ACGGGGATGA TTCCGGGGTA G
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| Protein sequence | MQPWTQIYTP LGSLWLSALA AAIPILFFFV ALAVLRMKGH VAAAVTLALA LAVAIFAYGM
PAQQAFAAAG FGFAYGLWPI AWIIVTAVFL YKIVVKTGQF DVIRASVLSI TDDQRLQMLL
IGFAFGAFLE GAAGFGAPVA ITAALLVGLG FNPLYAAGLC LIANTAPVAF GAMGIPIIVA
GQVTGIDPMH IGAMAGRQLP LLSLAVPFWL VFMMDGAKGV RETWPAALVV GGSFAVTQYF
TSNHIGPELP DITSALVSLI SLAAFLRVWQ PRSASQAAGG TVAAGGTVAM AGFGGGMGAP
ASRKASPYTF GQTVRAWAPF GILTAIVTVW SLAPFKALFA GNGALAGTVL KFKVPMLDQL
VIKSAPIVAS PKPYEAVLKL DLLSAVGTAI LLTAIISAVL LRMKPSDAIT TFKETLLELR
RPIASIGLVL AFAFVANYSG MSSTLALLLA GTGAAFPFFS PLLGWLGVFL TGSDTSSNAL
FCSLQHTTAH QIGVSDTLLV AANTTGGVTG KMISPQSIAV ACAATGLVGK ESELFRFTVK
HSLLFAAIVG VITMIQAYWL TGMIPG
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