Gene Rmet_5885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5885 
Symbolamn 
ID4042749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp80911 
End bp82401 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content64% 
IMG OID637981304 
ProductAMP nucleosidase 
Protein accessionYP_588013 
Protein GI94314804 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01717] AMP nucleosidase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCTG CCATGAATGC CACGATCTTC TCCTCCGCCC ACCCGGCAGA TCAGCTTGCC 
GAGTTCAACG ACGCAGATAG CGCGCTGGCG CGTATCCGCG AGATCTATGA CAGCTCAGTG
GCCGCCGTGC GCGCGCGATT TGACGCGTTT GCCCAGGGCA AGCCGCTGCC GTCGGCCGCG
CACGCGTGCT ATCCATACCT GGGCATCTCG GTCAATCTCG AGACGATGGT CACCGACAGC
CGGCCTTCCT GGGGCACGGT GGCCTATCCC GGGGTCTATG GCACCACGGT GACGCGGCCG
GACCTGCTGT GCGACTACTA CCGCGACCAG ATCGAGCGCC TGATGCGTTA TCACCGCGTG
CCGGTGGTGG TAGGGCTTTC GCGCCGACCG ATCCCGCTGC CGTTCGTGAT CGAAGCATCG
ACCACCGATA TCAGCTACAC GCAGGCGCGT GAACTCGAGG CGTCATTCGT GCTGCCGGAA
CTGAGCCGCA TTGATGACTC GATCGCCAAT GGCACGTATG AGCCCACTCC GGGCGAAGCC
TGGCCGCTGT CGCTGTTTTC TGCGGAGCGT GTGGATCTGG CACTGCAGCG GCTTTATCAC
TACACGGGTA CCGCGCCGCA GCATTTCCAG CGTTTCGTGC TGTTCACAAA CTATCAACGT
TACGTCGACG AGTTCGTGAC ACTGGGCCGT TCGCTGATGG CCGGTGACGG TGGCGATGGC
TATGTGCGCT TTGTCGAGCC CGGCGACGTG ATCCAGCAAC TCGGCGAGCA GGAGCCGGAT
GACGCGACAC GTCCACGCGC ATTGCCGCAG ATGCCGGCCT ACCACCTCGT GCGCGAGGAT
GGGCTGGGTG TCACGCTGGT CAACATCGGC GTGGGGCCTT CCAACGCGAA GACGATGACG
GACCACCTCG CCGTGCTGCG CCCACATTGC TGGCTGATGG TGGGCCACTG CGGCGGGCTG
CGCCGCTCGC AGCAGCTTGG TGACTACGTG CTGGCGCATG CGTATGTGCG CGACGACCAC
GTGCTCGACC ACGACCTGCC GCCCTGGGTG CCGGTGCCGC CGATCGCCGA GATCCAGGTG
GCATTGCAGG AAGCAGTGGC GCGTGTGACG GGATTGTCCG GTACCGAGAT GAAGACACGG
ATGCGCACAG GCACGGTGGT GTCAACCGAC GATCGCAACT GGGAACTGAA ATCGAAGTCG
CTCTACGCGC GCTTCAACCA GTCACGCGCA ATCGCCATCG ACATGGAGAG CGCCGCAGTG
GCCGCCAATG GCTTCCGACT GCGTGTGCCC TACGGCACGC TCCTGTGCGT ATCGGACAAG
CCGCTACACG GCGAACTCAA GCTGCGCGGC ATGGCGAATG CGTTCTACCG TCAGCGTGTG
AGCCAGCACA TGACCATCGG GCTGGAGGCG ATCCGCATAC TGCGTGAGAA CGGCGTCGAA
CAACTGCACT CGCGAAAGCT GCGCAGCTTC GACGAGCCTG CATTCAGATA A
 
Protein sequence
MMPAMNATIF SSAHPADQLA EFNDADSALA RIREIYDSSV AAVRARFDAF AQGKPLPSAA 
HACYPYLGIS VNLETMVTDS RPSWGTVAYP GVYGTTVTRP DLLCDYYRDQ IERLMRYHRV
PVVVGLSRRP IPLPFVIEAS TTDISYTQAR ELEASFVLPE LSRIDDSIAN GTYEPTPGEA
WPLSLFSAER VDLALQRLYH YTGTAPQHFQ RFVLFTNYQR YVDEFVTLGR SLMAGDGGDG
YVRFVEPGDV IQQLGEQEPD DATRPRALPQ MPAYHLVRED GLGVTLVNIG VGPSNAKTMT
DHLAVLRPHC WLMVGHCGGL RRSQQLGDYV LAHAYVRDDH VLDHDLPPWV PVPPIAEIQV
ALQEAVARVT GLSGTEMKTR MRTGTVVSTD DRNWELKSKS LYARFNQSRA IAIDMESAAV
AANGFRLRVP YGTLLCVSDK PLHGELKLRG MANAFYRQRV SQHMTIGLEA IRILRENGVE
QLHSRKLRSF DEPAFR