Gene Rmet_5873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5873 
Symbol 
ID4042737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp69226 
End bp69924 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID637981292 
Productpeptidase (C39-family, bacteriocin processing) 
Protein accessionYP_588001 
Protein GI94314792 
COG category[R] General function prediction only 
COG ID[COG3271] Predicted double-glycine peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATGC GCAGCCTGCT GTTGGCAGCC GCCACGCTGG CGGTGGCGCT GGGTGGCATC 
GCCGAAGCCC GCGCCGATAC CATTCGCATT CCGGGCGATC AGGGCAACTC TTACACAGTG
CCCGTGACCA GCCTGCGCGA AGCGCGCTTC CGCACGACCA TCCGACAGCA ATACGACTTC
AGCTGCGGCT CGGCCGCCGT GGCCACGCTA CTGACCTTTC AGTACGGATT CCCCGTCAAT
GAAGAGACGG TCTTCGCCAA CATGTATGTC AACGGCGATC AGGCCAAGAT CCGCTCGGAA
GGATTCTCCC TGCTTGACAT GAAGCGGTTC CTCGAGTCGC GCGGGTTCCT GGCCGACGGC
TACGAGTTGC CGCTATCGAA GCTCGAGGAA GCGCAGATTC CGGCGATCGT GCTGATCGTC
GAGAACGGTT ATCACCACTT CGTCGTGATC AAGGGGATCA AGGGCGACCG CGTGCTGATC
GGTGACCCCG CGCGCGGCAC CCGCTCCATC GAGCGCGATC ACTTCGAAAA GATCTGGGAC
AGCCAGTTGC TGTTCGTTAT CCACAATCGC ACGGACCGCG CGCGATTCAA CCTGGCAGCC
GACTGGCGCG TGGCGCCGTC GGGCCCTTAC TGGATGGGAG TTCCGCGAGA CAGTCTGTTC
TTCACCGTCA TGCCAAAGCA TGGCCCCGCC GATTTCTGA
 
Protein sequence
MIMRSLLLAA ATLAVALGGI AEARADTIRI PGDQGNSYTV PVTSLREARF RTTIRQQYDF 
SCGSAAVATL LTFQYGFPVN EETVFANMYV NGDQAKIRSE GFSLLDMKRF LESRGFLADG
YELPLSKLEE AQIPAIVLIV ENGYHHFVVI KGIKGDRVLI GDPARGTRSI ERDHFEKIWD
SQLLFVIHNR TDRARFNLAA DWRVAPSGPY WMGVPRDSLF FTVMPKHGPA DF