Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5873 |
Symbol | |
ID | 4042737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 69226 |
End bp | 69924 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637981292 |
Product | peptidase (C39-family, bacteriocin processing) |
Protein accession | YP_588001 |
Protein GI | 94314792 |
COG category | [R] General function prediction only |
COG ID | [COG3271] Predicted double-glycine peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATGC GCAGCCTGCT GTTGGCAGCC GCCACGCTGG CGGTGGCGCT GGGTGGCATC GCCGAAGCCC GCGCCGATAC CATTCGCATT CCGGGCGATC AGGGCAACTC TTACACAGTG CCCGTGACCA GCCTGCGCGA AGCGCGCTTC CGCACGACCA TCCGACAGCA ATACGACTTC AGCTGCGGCT CGGCCGCCGT GGCCACGCTA CTGACCTTTC AGTACGGATT CCCCGTCAAT GAAGAGACGG TCTTCGCCAA CATGTATGTC AACGGCGATC AGGCCAAGAT CCGCTCGGAA GGATTCTCCC TGCTTGACAT GAAGCGGTTC CTCGAGTCGC GCGGGTTCCT GGCCGACGGC TACGAGTTGC CGCTATCGAA GCTCGAGGAA GCGCAGATTC CGGCGATCGT GCTGATCGTC GAGAACGGTT ATCACCACTT CGTCGTGATC AAGGGGATCA AGGGCGACCG CGTGCTGATC GGTGACCCCG CGCGCGGCAC CCGCTCCATC GAGCGCGATC ACTTCGAAAA GATCTGGGAC AGCCAGTTGC TGTTCGTTAT CCACAATCGC ACGGACCGCG CGCGATTCAA CCTGGCAGCC GACTGGCGCG TGGCGCCGTC GGGCCCTTAC TGGATGGGAG TTCCGCGAGA CAGTCTGTTC TTCACCGTCA TGCCAAAGCA TGGCCCCGCC GATTTCTGA
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Protein sequence | MIMRSLLLAA ATLAVALGGI AEARADTIRI PGDQGNSYTV PVTSLREARF RTTIRQQYDF SCGSAAVATL LTFQYGFPVN EETVFANMYV NGDQAKIRSE GFSLLDMKRF LESRGFLADG YELPLSKLEE AQIPAIVLIV ENGYHHFVVI KGIKGDRVLI GDPARGTRSI ERDHFEKIWD SQLLFVIHNR TDRARFNLAA DWRVAPSGPY WMGVPRDSLF FTVMPKHGPA DF
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