| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5827 |
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| Symbol | |
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| ID | 4042691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 14159 |
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| End bp | 15715 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637981246 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_587955 |
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| Protein GI | 94314746 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.671788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGA CCCAGGGCCT ACACCGTCGT GTGCAGCAGA CGCCCGACCA CGTCGCCACG
ATATTCAGAA GCCGCCGGCG TACCTATCGT GAGTTCTCCG AGCGTGTCTC GCGCCTCGCC
GGCGCCTTGC AGCAACTCGG CATGAACCCA GGCGACCGCG TCAGCATGCT GTCCCTGAAC
TCGGACCGCT ATCTCGAATA CGCAATGAGC GTGTGGTGGG GCGGTGGCGT CCTCAATCCA
GTCAACACGC GCTGGAGCGT GCCGGAAATC GTCTATTCGC TCGATGACTG CGATACCGGC
ATCCTGATCG TCGACGATCA TTTTCTGGCC ATGGCCGAGC CGATTCGCGC CACGGCGAAG
CGGGCACCGA TTTTGATTCA TGCGGGCGAC GGCGCGCCGC CGGCAGGAAT GCTGGGATTC
GAGGCCCTGC TCGCAGACGC GAGCCCTGTA CCGGACGCCA TGCGCGGCGG CGAGGATCTG
GCCTCGATCA TGTACACGGG CGGCACCACC GGCAAGCCGA AGGGTGTCAT GCAGTCGCAC
CTGAACCTGT GGTCGTCGTC GATCTCGCGC CTCGCCCAGT TCCCGCTGGA CGAAGCGACG
ATCACGCTCC ACGCGGCACC GCTGTTCCAT ACGGCGGCGA TGGCCAAGGC AGTGGGTGTG
TTCGTCATCG GCGGCACGCA CACGATGGTC CCGACGTTCG ATCCGGCCGA GGTGCTGGAA
ACGCTCGAAC GCGAGCGCGT CAACGACATC ATGCTCGTGC CCACGATGCT GCAGGCGATC
CTGGCGTGCC CGGACTTCGC CAGACGCGAT GTCAGCAGCC TGAAGCGCAT CAACTATGGC
GCGTCACCGA TCAACGGCGC GGTGCTCGAT GCGGCGCTGG CCGCCATGCC GAATGTCGAG
TTCTCGCACG CCTATGGGCT GACCGAAGCG TCGCCGGTGG TATCGGTCAA TCCGCCTGCC
AACCACGGCC CGGTGGGCCG CGCCAGCGGG CTGTACCGGT CGGCGGGCCG CCCCGGCTTC
GGTGTGTTCG TCAAGGTCGT CGACCCGAAC GGCGATGAAG TCCCACGCAA CACGATCGGC
GAGATCATCG TGCGCGGCCC CAACATCATG CAGGGATACT GGAACAAGCC GGAGGAAACG
CGGCAGGCAC TGCGCAACGG CTGGCTGCAT ACGGGCGACG GCGCATACAT GGACGATGCC
GGCTATCTGT TCATCGTCGA TCGCATCAAG GACATGATCG TCACCGGCGG CGAGAACGTC
TATTCGGCCG AGGTCGAGAA CGCGCTGGCC CAACATCCGG CAGTCCATTC CTGCGCGGTC
ATTGGCGTGC CGCACGAGCG CTGGGGCGAA GCGGTTCACG CGGTGGTGGT GCTCAGACCC
GGCTTGCAGG CTGGCGAGGA CGAATTGCGC ACGCATTGCC GCGCGCTCAT CGCCAGCTAC
AAGTGCCCCA AGAGCGTGGA GTTCCGCACC GAGCTGCCGC TCTCCGCAGC GGGCAAGATC
CTCAAGCGCG ACCTGCGCAC GCGCTACTGG CAGGACCAGC CGCGGCAGGT CAGCTGA
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| Protein sequence | MYLTQGLHRR VQQTPDHVAT IFRSRRRTYR EFSERVSRLA GALQQLGMNP GDRVSMLSLN
SDRYLEYAMS VWWGGGVLNP VNTRWSVPEI VYSLDDCDTG ILIVDDHFLA MAEPIRATAK
RAPILIHAGD GAPPAGMLGF EALLADASPV PDAMRGGEDL ASIMYTGGTT GKPKGVMQSH
LNLWSSSISR LAQFPLDEAT ITLHAAPLFH TAAMAKAVGV FVIGGTHTMV PTFDPAEVLE
TLERERVNDI MLVPTMLQAI LACPDFARRD VSSLKRINYG ASPINGAVLD AALAAMPNVE
FSHAYGLTEA SPVVSVNPPA NHGPVGRASG LYRSAGRPGF GVFVKVVDPN GDEVPRNTIG
EIIVRGPNIM QGYWNKPEET RQALRNGWLH TGDGAYMDDA GYLFIVDRIK DMIVTGGENV
YSAEVENALA QHPAVHSCAV IGVPHERWGE AVHAVVVLRP GLQAGEDELR THCRALIASY
KCPKSVEFRT ELPLSAAGKI LKRDLRTRYW QDQPRQVS
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