| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5823 |
|---|
| Symbol | tauD |
|---|
| ID | 4042687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 10072 |
|---|
| End bp | 10959 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637981242 |
|---|
| Product | taurine dioxygenase 2-oxoglutarate-dependent |
|---|
| Protein accession | YP_587951 |
|---|
| Protein GI | 94314742 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC GCGAGCAAAC GGCTGCCGAA CAGATTGCAG CCCCGTTCTC GATCACCCCC
GTGACGCCCG TCATCGGCGC GGAGATCGGC GATATCGATC TGCGCGAAAC GCTGGACGAT
CCTACCTATC AGGCACTGCG CCAGGCACTG GTGCGCCACA AGGTCCTGTT CTTCCGCGAT
CAGGACATTA CGCCCGCGCA GCACGTGGCG CTTGCCCGGC GCTTTGGCGA ACTCGAGGTC
CATCCGGTCT TTCCACATCA CCCCGACCAT CCCGAGCTGG TGCTGCTGGG CGGGAACAAG
GATACGAAGG GGCGCGAGAA CATCTATCAC TCGGACGTCT CATGGCGTGC CGTGCCGTCG
ATGGGATCGA TGTTGCGCTG CGTGGAATGT CCGCCGATGG GCGGCGACAC GATCTGGGTC
AACATGGCCC AGGCGTATGC CGGACTGCCG GACGATGTGA AGGCGCGAAT CGAGGGCCTC
GAGGCGGTGC ATGACCTGAT GCCGGGGTTC GGCGCGCGCA TGTCGGCCGA GGAGCGCCTT
GTCAACCGCG AGAAGTTCCC GCCCGCCACG CATCCGGTGG TGCGCACTCA TCCTGAAAGC
GGCGAGAAGA TCCTCTACGT CAACGAAGGC TTCGTGACGC ACCTGGCCAA CTATGGCGCG
CACATCCAGT ATCGCGTGGG GGCGGATTTC CGCCTGGGCG AGCTCGACCT GCTGCAGTAC
CTCTATCGGC AGGCCACGGT GCCCGAATAT CAGGTCCGGA TGAAGTGGCG ACCCAACACC
ATCGCGTTCT GGGACAACCG CTCCACCCAG CACTACGCGG TGCAGGACTA CTTCCCCGCT
GTGCGTCGCA TGATGCGTGC GACGATCATC GGCGAGCGTC CAGTCTGA
|
|---|
| Protein sequence | MNAREQTAAE QIAAPFSITP VTPVIGAEIG DIDLRETLDD PTYQALRQAL VRHKVLFFRD
QDITPAQHVA LARRFGELEV HPVFPHHPDH PELVLLGGNK DTKGRENIYH SDVSWRAVPS
MGSMLRCVEC PPMGGDTIWV NMAQAYAGLP DDVKARIEGL EAVHDLMPGF GARMSAEERL
VNREKFPPAT HPVVRTHPES GEKILYVNEG FVTHLANYGA HIQYRVGADF RLGELDLLQY
LYRQATVPEY QVRMKWRPNT IAFWDNRSTQ HYAVQDYFPA VRRMMRATII GERPV
|
|---|
| |