Gene Rmet_5783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5783 
SymbolactP 
ID4042647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2541242 
End bp2542903 
Gene Length1662 bp 
Protein Length553 aa 
Translation table11 
GC content64% 
IMG OID637981202 
Productacetate permease 
Protein accessionYP_587911 
Protein GI94314702 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.061822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC ATCACGTTAT CGCCGCAGGC GGCGCATTGC TGTTGTCGAC GGCCGCGCTG 
GCCGCGGGTG GTGATCTTGG ACAGGCCGTC AAACAGCCCA CCAACTGGAC GGCCATCGGC
ATGTTCGTCG TGTTCGTCAT CGGCACGCTG TTCATCACCA AATGGGCGGC CAAGCGGACC
ACGTCCGCGG CGGCGTTCTA TACGGGCGGT GGTGGCATCA CCGGCTTCCA GAACGGCCTG
GCCATCGCTG GCGACTACAT GTCGGCAGCA TCGTTCCTCG GCATTTCCGC CGCCGTGTTC
GCAAACGGCT ACGACGGCCT GATCTACTCG ATCGGCTTCC TGGTCGGCTG GCCAATCATC
ACGTTCCTGA TGGCGGAGCG CCTGCGCAAC CTCGGCCGTT TCACGTTTGC CGATGTGGCC
GCCTACCGCT TCAAGCAGGG CCCGATCCGC GCGTTCGCGG CGTCGGGCAC GCTGGTGGTG
GTGGCGTTCT ACCTGATCGC GCAGATGGTG GGCGCCGGGC AACTGATCAA GCTGCTGTTC
GGGCTCGAGT ACTGGATCGC GGTGGTGATC GTTGGCGCGC TGATGATGGT GTACGTGCTG
TTCGGCGGCA TGACGGCAAC CACCTGGGTG CAGATCATCA AGGCTGGCCT GCTGCTGGGC
GGCGCATCAT TCATGGCCTT CATGGTCATG GCGCAGTTCC ACTTCAGCCC CGAAGCACTG
TTCGCCAAGG CCGTTGAAGT CCATGCCAAG AAGGACGCGA TCATGGGCCC GGGCACATTC
ATCAAGGACC CGATTTCGGC GATCTCATTC GGCATCGCGC TGATGTTCGG CACGGCCGGC
CTGCCGCACG TCCTGATGCG ATTCTTCACC GTGCCCAATG CCAAGGAAGC GCGCAAGTCC
GTGTTCTGGG CCACCACGTG GATCGGCTAC TTCTACATCC TGACGTTCAT CATCGGCTTC
GGCGCCATCG TGCTGGTGAG CACCAACCCG ACGTTCCAGG ACGGTAGCGG CAAGCTGCTC
GGCGGCCTCA ACATGGCGGC CGTTCACCTG GCCACTGCAG TGGGCGGCAA CGTGTTCCTC
GGGTTCATCT CGGCGGTGGC GTTCGCGACA ATCCTGGCCG TGGTGGCCGG CCTCACGCTG
GCCGGCGCGT CGGCGGTGTC GCACGACCTG TACTCCACGG TCTTCATGCA CGGCAAGGCA
ACCAGTTCGA TGGAACTGCG CGTGTCGCGC ATCACCACGA TCATCCTCGG CATCATCGCC
GTGGTGCTCG GCATCGTCTT CGAGAAGCAG AACATCGCGT TCATGGTGTC GCTGGCGTTC
GCCGTGGCGG CATCGGCCAA CTTCCCGGTC CTGTTCATGT CGGTGCTGTG GAAGAACTGC
ACCACGCGCG GCGCGATGGT TGGCGGCTTC CTCGGCCTGC TGTCAGCCGT GATTCTGACG
GTCCTGTCCC AGGCGGTGTG GGTCGACGTG TTCCACTTCA AGAATGCGCC ATTCCCGTAC
ACGTCTCCGG CGCTGTTCTC AATGACGATC GGCTTCGTCG GCATCTGGTT CTTCTCGATC
ACCGACAGGT CACCCCGGGC ACGTATCGAC CGTGCCGGCT TCGAGGCACA GGAACTGCGT
TCCGAGACCG GCATCGGCGC CGTCGGGGCC GCAAGCCACT GA
 
Protein sequence
MKTHHVIAAG GALLLSTAAL AAGGDLGQAV KQPTNWTAIG MFVVFVIGTL FITKWAAKRT 
TSAAAFYTGG GGITGFQNGL AIAGDYMSAA SFLGISAAVF ANGYDGLIYS IGFLVGWPII
TFLMAERLRN LGRFTFADVA AYRFKQGPIR AFAASGTLVV VAFYLIAQMV GAGQLIKLLF
GLEYWIAVVI VGALMMVYVL FGGMTATTWV QIIKAGLLLG GASFMAFMVM AQFHFSPEAL
FAKAVEVHAK KDAIMGPGTF IKDPISAISF GIALMFGTAG LPHVLMRFFT VPNAKEARKS
VFWATTWIGY FYILTFIIGF GAIVLVSTNP TFQDGSGKLL GGLNMAAVHL ATAVGGNVFL
GFISAVAFAT ILAVVAGLTL AGASAVSHDL YSTVFMHGKA TSSMELRVSR ITTIILGIIA
VVLGIVFEKQ NIAFMVSLAF AVAASANFPV LFMSVLWKNC TTRGAMVGGF LGLLSAVILT
VLSQAVWVDV FHFKNAPFPY TSPALFSMTI GFVGIWFFSI TDRSPRARID RAGFEAQELR
SETGIGAVGA ASH