Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5783 |
Symbol | actP |
ID | 4042647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2541242 |
End bp | 2542903 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637981202 |
Product | acetate permease |
Protein accession | YP_587911 |
Protein GI | 94314702 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.061822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACGC ATCACGTTAT CGCCGCAGGC GGCGCATTGC TGTTGTCGAC GGCCGCGCTG GCCGCGGGTG GTGATCTTGG ACAGGCCGTC AAACAGCCCA CCAACTGGAC GGCCATCGGC ATGTTCGTCG TGTTCGTCAT CGGCACGCTG TTCATCACCA AATGGGCGGC CAAGCGGACC ACGTCCGCGG CGGCGTTCTA TACGGGCGGT GGTGGCATCA CCGGCTTCCA GAACGGCCTG GCCATCGCTG GCGACTACAT GTCGGCAGCA TCGTTCCTCG GCATTTCCGC CGCCGTGTTC GCAAACGGCT ACGACGGCCT GATCTACTCG ATCGGCTTCC TGGTCGGCTG GCCAATCATC ACGTTCCTGA TGGCGGAGCG CCTGCGCAAC CTCGGCCGTT TCACGTTTGC CGATGTGGCC GCCTACCGCT TCAAGCAGGG CCCGATCCGC GCGTTCGCGG CGTCGGGCAC GCTGGTGGTG GTGGCGTTCT ACCTGATCGC GCAGATGGTG GGCGCCGGGC AACTGATCAA GCTGCTGTTC GGGCTCGAGT ACTGGATCGC GGTGGTGATC GTTGGCGCGC TGATGATGGT GTACGTGCTG TTCGGCGGCA TGACGGCAAC CACCTGGGTG CAGATCATCA AGGCTGGCCT GCTGCTGGGC GGCGCATCAT TCATGGCCTT CATGGTCATG GCGCAGTTCC ACTTCAGCCC CGAAGCACTG TTCGCCAAGG CCGTTGAAGT CCATGCCAAG AAGGACGCGA TCATGGGCCC GGGCACATTC ATCAAGGACC CGATTTCGGC GATCTCATTC GGCATCGCGC TGATGTTCGG CACGGCCGGC CTGCCGCACG TCCTGATGCG ATTCTTCACC GTGCCCAATG CCAAGGAAGC GCGCAAGTCC GTGTTCTGGG CCACCACGTG GATCGGCTAC TTCTACATCC TGACGTTCAT CATCGGCTTC GGCGCCATCG TGCTGGTGAG CACCAACCCG ACGTTCCAGG ACGGTAGCGG CAAGCTGCTC GGCGGCCTCA ACATGGCGGC CGTTCACCTG GCCACTGCAG TGGGCGGCAA CGTGTTCCTC GGGTTCATCT CGGCGGTGGC GTTCGCGACA ATCCTGGCCG TGGTGGCCGG CCTCACGCTG GCCGGCGCGT CGGCGGTGTC GCACGACCTG TACTCCACGG TCTTCATGCA CGGCAAGGCA ACCAGTTCGA TGGAACTGCG CGTGTCGCGC ATCACCACGA TCATCCTCGG CATCATCGCC GTGGTGCTCG GCATCGTCTT CGAGAAGCAG AACATCGCGT TCATGGTGTC GCTGGCGTTC GCCGTGGCGG CATCGGCCAA CTTCCCGGTC CTGTTCATGT CGGTGCTGTG GAAGAACTGC ACCACGCGCG GCGCGATGGT TGGCGGCTTC CTCGGCCTGC TGTCAGCCGT GATTCTGACG GTCCTGTCCC AGGCGGTGTG GGTCGACGTG TTCCACTTCA AGAATGCGCC ATTCCCGTAC ACGTCTCCGG CGCTGTTCTC AATGACGATC GGCTTCGTCG GCATCTGGTT CTTCTCGATC ACCGACAGGT CACCCCGGGC ACGTATCGAC CGTGCCGGCT TCGAGGCACA GGAACTGCGT TCCGAGACCG GCATCGGCGC CGTCGGGGCC GCAAGCCACT GA
|
Protein sequence | MKTHHVIAAG GALLLSTAAL AAGGDLGQAV KQPTNWTAIG MFVVFVIGTL FITKWAAKRT TSAAAFYTGG GGITGFQNGL AIAGDYMSAA SFLGISAAVF ANGYDGLIYS IGFLVGWPII TFLMAERLRN LGRFTFADVA AYRFKQGPIR AFAASGTLVV VAFYLIAQMV GAGQLIKLLF GLEYWIAVVI VGALMMVYVL FGGMTATTWV QIIKAGLLLG GASFMAFMVM AQFHFSPEAL FAKAVEVHAK KDAIMGPGTF IKDPISAISF GIALMFGTAG LPHVLMRFFT VPNAKEARKS VFWATTWIGY FYILTFIIGF GAIVLVSTNP TFQDGSGKLL GGLNMAAVHL ATAVGGNVFL GFISAVAFAT ILAVVAGLTL AGASAVSHDL YSTVFMHGKA TSSMELRVSR ITTIILGIIA VVLGIVFEKQ NIAFMVSLAF AVAASANFPV LFMSVLWKNC TTRGAMVGGF LGLLSAVILT VLSQAVWVDV FHFKNAPFPY TSPALFSMTI GFVGIWFFSI TDRSPRARID RAGFEAQELR SETGIGAVGA ASH
|
| |