| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_5735 |
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| Symbol | kpsF |
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| ID | 4042599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 2494891 |
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| End bp | 2495853 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637981154 |
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| Product | D-arabinose 5-phosphate isomerase |
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| Protein accession | YP_587863 |
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| Protein GI | 94314654 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGAGT CAATTTCTCT TGCAAAGCAA GTGGTAGCCA CGGAAATCCG CGCGCTGGAG
GCGATGAACG CACGCGTGAG CGAGGATTTT GGGCGCACCG TGAAGTGCAT CCTCAGCATG
AAAGGCAGAT TGGTCGTTGT CGGCATGGGG AAGTCCGGCC TGATTGGCCG GAAGATTGCG
GCCACCATGG CGTCGACGGG CACCCCGGCT TTCTCCGTAC ACGCTGGCGA GGCCTTTCAC
GGCGACCTCG GCATGATTCG CCCGACTGAC GTCGTGCTGA TGATCTCCAA CAGCGGCGAG
ACGGAGGAGT TGGTACGCTT GCTGCCGTTC CTCAGGCATC AGAACAACTA CGTCATCGCC
ATGACCGGTA AGCCGGCGTC GACGCTGGGG AAGGCGGCAA ATACGATTCT CGACATCAGC
GTCGAGCGTG AGGCATGCAA CAACAACCTG GCGCCAACCA GTTCCACGAC GGCCGCGCTG
GTTATGGGAG ACGCGCTGGC TGTCGTGCTG GCCTCTAAAC GCGGCTTTCA GCCGGAGGAC
TTCGCACGAT TTCACCCGGG CGGCAGCCTC GGACGGCGCT TGCTTACGCG AGTAGCGGAC
GTCATGCATA AGGGTACGCT GCCCGTATGC ACCGCACAGA CGTCCTTCAA GGATGTGGTC
CATGTCGTCA ATCGGGGTCG TATGGGACTG GCCTTGGTCA TGCAGGGAGA GCGCTTGCTC
GGCATCATTA CCGATGGCGA TATTCGCCGC GGATTCGACA CTGTGCATGA CTATCGCTCC
ATCCTCGCGG AAGACCTGAT GACTACAAGG CCAAAGGCAA TCGCACCGGA TGCGCGCGTT
GGTGACGCGG AGGCGCTGTT GCGCCAGGAG AAGATTGGCG CATTGGTGGT GCAGGACATT
GATGGCCGGG TCATTGGCAT CTTCCAAATG CATGGAGCGG AAGAGGCGCC CGGCGTGCAC
TAG
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| Protein sequence | MPESISLAKQ VVATEIRALE AMNARVSEDF GRTVKCILSM KGRLVVVGMG KSGLIGRKIA
ATMASTGTPA FSVHAGEAFH GDLGMIRPTD VVLMISNSGE TEELVRLLPF LRHQNNYVIA
MTGKPASTLG KAANTILDIS VEREACNNNL APTSSTTAAL VMGDALAVVL ASKRGFQPED
FARFHPGGSL GRRLLTRVAD VMHKGTLPVC TAQTSFKDVV HVVNRGRMGL ALVMQGERLL
GIITDGDIRR GFDTVHDYRS ILAEDLMTTR PKAIAPDARV GDAEALLRQE KIGALVVQDI
DGRVIGIFQM HGAEEAPGVH
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