Gene Rmet_5724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5724 
SymbolbvgS2 
ID4042588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2481279 
End bp2483633 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content57% 
IMG OID637981143 
Producttwo-component regulatory system sensory histidine kinase 
Protein accessionYP_587852 
Protein GI94314643 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCATC TTTCGGCGGC CTATTTCGTG ACTCCGTTTG CCCTGCTCGC TGCAATGATG 
CTCGTAGTGG CACGTTGCTG GCGCAACGCC AGACAGGCAA GCGCCAAGAT GGCAGAACTC
AAGGCCGAGC GCACCCTTTT CCAGTCGTTG CTGGACTCCT CGCCCAATGC GGTACTGGTG
GTGAGCCACG AGCACCGCAT CCTCAAAGTC AGCGAACCTT ACGCAAGGCT GTGCGGCGTC
AGTACCGAAG ATCTCATCGG GAAGCCATTG GTCCACAGCC ACACGACAAG CCGCTTTCTC
GATCTGGGTG GTCTACTGGA ACTCACCCTG CTCAGAATGG ACGGCAATGA ACGCTCCGAT
CTAATCACTC TCGGAATTCC GGAGCAATCT GTACGCACAT TCAGGGTGAA CGCCACACAA
TGCAGATCGG AAGATGGCGT GTTCTCGGGT ACCGCGATAG TGCTGACGGA TATCAGCGAA
CAGGTGGCAG CGCAGCATCG CGTCGATCAG ACTTCCGCAG CCATGGATGA CATCACTGAT
GCGCTATCGG TGACGTTCTT CCAGCTCTGT CGCGAATCAA ACGGCCATAT CTGGCTTCCC
TGGGTGAAGG GGATGCAAAA CACCACGCTG AACTGGTCAG CCGAGAGAAT GATGCGCGAC
GGCGGTGGCA TCCTTCCGAA TCTTGATGCC TCCGAAAAGA CACTATTCAT CGGGGCAGTA
GACCAATCCA TCGCAACGCA GCAGCCGATG GATGTTACCG TGCGCCTCAC CTCGGATAAC
CGGTGGGTAC ACATCGCCAG TGGCAATCCG AGAGTTGGCC CCAATGGCGC AACACTCTGG
TATGCCTATG CGATGGACGT AACCGAAATG CAGCGCTACA ACACGCTTCT GGCTACGGCC
AGTCGTGAGG CCGAAGCTGC CACGGAAGCC AAGTCTCGTT TTCTGGCCAC AATGAGTCAT
GAAATTCGCA CGCCACTGGC CACGGTCATT GCCTCGCTGG ACCTGCTGCG CGAGAGCGAA
CTCTCCACCC ACCAGCGGGA AGAACTGGAT CTGGCCGATC ATTCGGCCAA GCTTCTCCTG
GAGATTCTCG GCGATATCCT CGACTTTTCC AGGATCGAAG CAGGGGAGAT GAAGCTTGAA
CAGGCGCCGA TTGACCTGCG ACTGATCATC GAGGATGTTC TGCGCATCCA GGCGCGCCAA
ATCGAAAAGA AGGGCGTGAT ACTCGACTTC TACGTGGAAG CGGGGCTGGC CGCGACGTTG
CTTGGCGATG CAGTGCGGCT CAGGCAGATC GTGCTCAATC TCGTGGGTAA TGCTACAAAA
TTCACGCTTC AGGGCAGCAT CGTTGTTCGA GCATTGTTGA TAGCGGACCA TCCCGAAACA
CAGACGATTC AACTGGAAGT CAGCGACACT GGTATCGGAA TCCCCGCGGA GAAGCAAGCC
GCTCTCTTCA AGGCATTTTC TCAGGCTGAT GTCTCCACAA CGCGCCGATT CGGGGGCAGT
GGTCTGGGGC TGTCGATTTG CTCCAGGCTC GTTCAAGCCA TGGGTGGGGC CGTCGTCTTG
ACTAGTACGC CAGGTGTCGG CAGCACGTTC CGCGTGGAAC TGACGCTGCC CGTCGTCGAG
CGCAGCACGC GGATGGTGGA GTTTGCAAAA ACTCACATCG CGATTGATGT GTCGCGTGCA
GATGACGCAG CAGTGTTTCG TGAGCACGCT GTTGCACTCG GTATGCAGCT TGCCCCCCTT
GATTGCCTGA ATCCTTCCGA TATTGCTGTG ATTGATGAAG ACGCCGCCTC AGACAAAGTG
CCTGTGGGCG TGCTGACCAT CCCTTACGGG AAAAAGCACG GCAATCTGTC TGGCCCACCC
ATCTGGTGGA GCGAGTTTCG CGCGGCATGT CTCGATGCAG TTCTTCGCGA TACGCATCGG
TTTCCCGCGC AAGGTCAAGA TGTCACGGCA ACACCACCGA TCTCCGATTC GCTGGCCGGT
CTGACATCTC TACCGATTCT CGTCGCGGAA GATCACACAC CATTCCAGAT CGTAATTCGC
AGGCAGATTG AAAAGCTTGG TCTGGCATGT GACGTCGTAT CCGACGGAAA GGAGGCGCTG
GCTGCGATTC GCAACAAGCA ATATGGCATG ATCCTGACCG ACTGCCACAT GCCGTATATG
GACGGCTACG AACTCACCAG CGCGATTCGG GCATCCGAGG CTCAAGGACA ACGGCTCCCG
ATTGTCGCGC TGAGCGCGGA TGCTTCGGAT GAGCAAAGAC ACCGCGGCCG TGCCGCCGGT
ATGGACGACT TCCTGCTCAA GCCGCTCAAA CTCCCGGAAC TACGCGCGTG CATCCAGCGG
TGGGTGCTTC GGTGA
 
Protein sequence
MLHLSAAYFV TPFALLAAMM LVVARCWRNA RQASAKMAEL KAERTLFQSL LDSSPNAVLV 
VSHEHRILKV SEPYARLCGV STEDLIGKPL VHSHTTSRFL DLGGLLELTL LRMDGNERSD
LITLGIPEQS VRTFRVNATQ CRSEDGVFSG TAIVLTDISE QVAAQHRVDQ TSAAMDDITD
ALSVTFFQLC RESNGHIWLP WVKGMQNTTL NWSAERMMRD GGGILPNLDA SEKTLFIGAV
DQSIATQQPM DVTVRLTSDN RWVHIASGNP RVGPNGATLW YAYAMDVTEM QRYNTLLATA
SREAEAATEA KSRFLATMSH EIRTPLATVI ASLDLLRESE LSTHQREELD LADHSAKLLL
EILGDILDFS RIEAGEMKLE QAPIDLRLII EDVLRIQARQ IEKKGVILDF YVEAGLAATL
LGDAVRLRQI VLNLVGNATK FTLQGSIVVR ALLIADHPET QTIQLEVSDT GIGIPAEKQA
ALFKAFSQAD VSTTRRFGGS GLGLSICSRL VQAMGGAVVL TSTPGVGSTF RVELTLPVVE
RSTRMVEFAK THIAIDVSRA DDAAVFREHA VALGMQLAPL DCLNPSDIAV IDEDAASDKV
PVGVLTIPYG KKHGNLSGPP IWWSEFRAAC LDAVLRDTHR FPAQGQDVTA TPPISDSLAG
LTSLPILVAE DHTPFQIVIR RQIEKLGLAC DVVSDGKEAL AAIRNKQYGM ILTDCHMPYM
DGYELTSAIR ASEAQGQRLP IVALSADASD EQRHRGRAAG MDDFLLKPLK LPELRACIQR
WVLR