Gene Rmet_5714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5714 
SymbolbvgA 
ID4042578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2472968 
End bp2473600 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content55% 
IMG OID637981133 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_587842 
Protein GI94314633 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACCG TCCTCATTGT CGACGATCAC CCAGCAGTCC GACTCGTTAT CAAAACGCAG 
CTATCGCAAG TGCTCGGCGT TTCATCCGTG CTGGAAGCCG ACAACGGCCA GGCGGCGATC
GACGTTGTGC GGCAGTGCAA GCCCGATCTG GTTATCCTAG ATCTCGATAT TCCAAAGATC
AATGGGCTTG AGGTGATCCC CCGCCTGAAG GCCATCCAGC CCAATATCCG GGTGCTCGTG
ATTTCGGGGC AGGATCCGAT GACCTTTGCT CCTCGCGCCA TGCAGGTGGG CGCAAAGGGC
TTCGTCAGCA AGATGCAGGA CATGACGGAC ATCATGCGCT GTGTGGAATC TGTCCTGGCA
GGCTATACGC TCTTTCCCGC CGAGGTGGTT GAATCCGGTG CCGTGCCCGG CAAGGCCCGC
GAAGATAGCG AACTGCTGCA GCAACTGACT GACAAGGAGA TTCAGATCAT GCAGATGCTG
AGCAAGGGAA TGTCGAACAA GGCCATTGGA GACTCGCTCT TCATCAGTAA CAAGACCGTG
AGTAGCCACA AAACGCGCAT CATGGAAAAG TTACACGTCA CGACGTTGCT GGAACTGATC
GATTTTGCGC GGCGCTGCAA TATTGCACCT TGA
 
Protein sequence
MITVLIVDDH PAVRLVIKTQ LSQVLGVSSV LEADNGQAAI DVVRQCKPDL VILDLDIPKI 
NGLEVIPRLK AIQPNIRVLV ISGQDPMTFA PRAMQVGAKG FVSKMQDMTD IMRCVESVLA
GYTLFPAEVV ESGAVPGKAR EDSELLQQLT DKEIQIMQML SKGMSNKAIG DSLFISNKTV
SSHKTRIMEK LHVTTLLELI DFARRCNIAP