Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_5672 |
Symbol | copR2 |
ID | 4042536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 2431333 |
End bp | 2432019 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637981091 |
Product | DNA-binding response regulator |
Protein accession | YP_587800 |
Protein GI | 94314591 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTCC TGGTGGTCGA GGACGAAACC AAGACTGGCG AATACCTGAG GCAGGGCCTG ACCGAGGCCG GCTTCATCGT GGACCTCGTG CATAGCGGGC TGGACGGCCA GCATATGGCG CTGAACGAGT CCTACGACCT GCTGATCCTC GATGTGATGC TGCCCGATAT CGATGGCTGG CGCATCCTGC AGAACATCCG TGCCGCCGGC AATCCCGTGC CGGTGCTGTT CCTGACGGCC CGTGACAGCG TCGCCGACCG CGTGAAGGGG CTGGAACTCG GCGCGGACGA CTACCTCGTC AAGCCGTTCG CGTTCTCCGA ACTGCTGGCC CGCGTGCGCA CGCTGTTGCG CCGGGGTGCC GCGCAGGCAC CGGTCGATCG TATCCAGATC GCCGATCTCG TGCTGGACCT GGCCCGACGC AGAGCCACGC GCGCCGGGCG CAGGATCGTG CTGACCGGCA AGGAATTCGC GCTGCTGGAA CTGCTGGCCC GCCGCCGTGG CGAGGTATTG CCGCGTTCGC TGATCGCCTC GCAGGTCTGG GACATGAACT TCGACAGCGA CAGCAATGTG ATCGACGTGG CGATCCGCCG CCTGCGCGCG AAGATCGACG ATGACTTCGA CGATAAGCTG ATCCAGACCG TGCGTGGCAT GGGATATGTG CTGGAAGCGC CGGAGGATCT GGCCTGA
|
Protein sequence | MKLLVVEDET KTGEYLRQGL TEAGFIVDLV HSGLDGQHMA LNESYDLLIL DVMLPDIDGW RILQNIRAAG NPVPVLFLTA RDSVADRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGA AQAPVDRIQI ADLVLDLARR RATRAGRRIV LTGKEFALLE LLARRRGEVL PRSLIASQVW DMNFDSDSNV IDVAIRRLRA KIDDDFDDKL IQTVRGMGYV LEAPEDLA
|
| |