Gene Rmet_5641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5641 
Symbol 
ID4042505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2400778 
End bp2402337 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content65% 
IMG OID637981060 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_587769 
Protein GI94314560 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCATA ACCTGAGCCT GAGAAAGAAG CTCATGCTGC CGCTGGTGCT GAGCTGGACC 
TGCCTGCTGG CCATCACGCT GTGGAATGCA TGGCAAATGC GAGACCTGCG TCTGCGGGAT
CGAGAACTGA CGCTGCAACA GGTCACGGAC ACGGCCAACT CGGTCGTGGC CGAGTACGAA
GCCATGGCGC GCGCAGGCAA GCTGAGCGCC GAGGAAGCCC AGAAGCAGGC GCTCGACCGC
GTGCGCGTGA TGCGTTTTGG CGGCGATGGC TACTTCACCG TGATGAGGTC CGACGCTGTC
GTTCTGATGC ACGCGATCAA GCCCGAACTC GATGGCAAGA ACATGTCGGA GATGAAGGAC
CCTAACGGCG TCTATCTGTT CCGCGATATC GCGCAGATCG GCAAGACCGC CGGCAAGGGC
TTCCTTGAAT ACGCCTGGCC CAAGCCAGGG GCCGAGGCGC CGCAGCCCAA ACTGAGCTAT
GTGCTGAACT TCAAGCCGTG GGACTGGAAC TTCATCGCCG GTTTCTACAT GGATGACATC
CAGGCCGAGT TCCGCGCGTC GCTCTGGCAA GCGCTCGGCT GGCTGCTGGG CGTGGGCGCG
CTGATGACCG TGGTGATGGT GCGCGTTTCC GCCAGTCTGC AGAAGCAGCT TGGCGGCGAA
CCATCGCTGA CCTCGGAGAT CGCCGCGCGC ATCGCCGAAG GTGATCTTGC TTCGCACGTG
AACGTGGCGC CGAACGATCG GGAAAGCGTG CTGTTCAACA TGCAGCAGAT GCAGGGGCGG
CTGACGGGTG CCATCGGCCA GATTCGCGGT TCGGCGGATG CGATCGCAGG CGCCGCCAAG
CAGATTGCGG CCGGCAATGT CGACCTGTCA CGCCGCAGCG AGGAACAGGC CGCATCGCTT
GAGCAGACCG CGGCCAGCAT GGAAGAGCTG ACCGGCACGG TTCGCCAGAG CGCTGACAAC
GCCCGCCAGG CGGCGCGGCT GGCCGAAGGC GCATCGGAGA TCGCTGTACG CGGCGGAGCG
ATCGTGCACC AGGTGGTGGA CACGATGGGC GAGATCAAGG CGGCGTCCAG CAAGGTGGTG
GACATCATCG GCGTCATCGA GGGCATTGCA TTCCAGACCA ATATCCTGGC GCTGAACGCG
GCGGTGGAGG CCGCGCGCGC CGGCGAGCAG GGACGCGGCT TTGCGGTGGT GGCCGGCGAG
GTGCGCAGCC TGGCCCAGCG TAGCGCCACG GCGGCCAAGG AGATCAAGGG ATTGATCGAC
AACTCGGCGC AGCGTGTCGA GGACGGCTCA GTGCTGGTCG AAGACGCAGG CAAGGCGATG
GGAGAAATCG TCGAGGCCGT GAAGCGCGTG ACCGACCTGA TGGGCGAAAT GCGTGCGGCC
ACCGAAGAAC AGACCGGCGG GATCGAGCAG GTCAACCAGG CCGTCTCACA GATGGACCAG
ATGGCGCAGC AGAATGCGGC GCTGGTGGAA GAGGCAACCG CCGCCGCGGC CTCGCTCGAG
GATCAGGCTG ATGCACTGCA CCGCGCAGTC GGCCAGTTCA GGCTAGCGGG CGCGATTTAG
 
Protein sequence
MLHNLSLRKK LMLPLVLSWT CLLAITLWNA WQMRDLRLRD RELTLQQVTD TANSVVAEYE 
AMARAGKLSA EEAQKQALDR VRVMRFGGDG YFTVMRSDAV VLMHAIKPEL DGKNMSEMKD
PNGVYLFRDI AQIGKTAGKG FLEYAWPKPG AEAPQPKLSY VLNFKPWDWN FIAGFYMDDI
QAEFRASLWQ ALGWLLGVGA LMTVVMVRVS ASLQKQLGGE PSLTSEIAAR IAEGDLASHV
NVAPNDRESV LFNMQQMQGR LTGAIGQIRG SADAIAGAAK QIAAGNVDLS RRSEEQAASL
EQTAASMEEL TGTVRQSADN ARQAARLAEG ASEIAVRGGA IVHQVVDTMG EIKAASSKVV
DIIGVIEGIA FQTNILALNA AVEAARAGEQ GRGFAVVAGE VRSLAQRSAT AAKEIKGLID
NSAQRVEDGS VLVEDAGKAM GEIVEAVKRV TDLMGEMRAA TEEQTGGIEQ VNQAVSQMDQ
MAQQNAALVE EATAAAASLE DQADALHRAV GQFRLAGAI