Gene Rmet_5579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5579 
Symbol 
ID4042440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2332138 
End bp2332692 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content68% 
IMG OID637980997 
Productcytochrome b561 family protein 
Protein accessionYP_587707 
Protein GI94314498 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.851973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGC CCGCGGACCG GACGAACGCC CCCGACACGA TTCGCGTCTG GGACGTGGTC 
GTGCGTTTCA CGCACTGGAG CGTAGCGGCC ATCGTCTGCT TTGACCTCGT CCAGGACTCC
GGAGACAAGG TGCACCGAAC CCTCGGCTAC ATCGCCGCGG GGCTGGTGCT GTTCCGGGTC
TTGTGGGGCT TCATCGGCAG CCAGCCTGCG CGTTTCCGCA CGTGGCTGCC ACGTCCGTCC
GCCGTGCTGG CCTATGCCAA GGCACTGATC GCCGGCCGCG CGCCGCGCCA TGTCAGCCAT
ACGCCGCTGG GCGCCGTCGC CATGCTGGCC ATGTGGACGC TGATCCTGGC GCTGGCCGTC
ACCGGCTGGA TCTCGCGTCT CGATGCGTTC TGGGGCGAGG ATTTGCCAGT CGACATCCAC
CGCTGGCTGG CGAACGCGCT GCTGGCGCTG GTGATCCTTC ATGTGGCCGC AGCCATCGTC
ATGAGCATCA AGGGCCGCGA GAACCTCGTC GCTGCCATGA TCACGGGCCG CAAGCCACGT
GATCCGCGCC GCTAG
 
Protein sequence
MSAPADRTNA PDTIRVWDVV VRFTHWSVAA IVCFDLVQDS GDKVHRTLGY IAAGLVLFRV 
LWGFIGSQPA RFRTWLPRPS AVLAYAKALI AGRAPRHVSH TPLGAVAMLA MWTLILALAV
TGWISRLDAF WGEDLPVDIH RWLANALLAL VILHVAAAIV MSIKGRENLV AAMITGRKPR
DPRR