Gene Rmet_5557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5557 
Symbol 
ID4042418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2305091 
End bp2305885 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content57% 
IMG OID637980975 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_587685 
Protein GI94314476 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTAC GATATGGCAG CGTCCTCTAC GCGGTAAAAG GTAGCGTGGC AATCGTGACG 
TTAAATCGGC CCGAGTTTCG CAACGCCTTG GGCGGCACGA TTCGGGAAGA CATCATCGAA
GTGATGGCGG TCGCTGAGGC AAACGATAGC GTTCGAGCCA TTATTCTCAC GGGTGCTGGA
AGTGCCTTCT GCTCGGGCGG AGACCTGAAC GAGCTGTATC TCCGCGCAGT TCAGGGACAG
ACGATCGCTG AGAAAACAGA GCCCATTCGT GACCGGACAC TCCTCGCGGT GTATGAGGCA
AAGAAGCCAG TGATAGCGGC AGTGAATGGC CCGGCCATGG GCGCGGGAAT GAACCTGGCA
CTGGCCGCAG ACATTCGTAT CGCGTCGAAA GAAGCTCGGT TCTCCCAAGC TCACACGATG
CGCGGGATGA TGCCCGACTA TGGAGGCACG TATCTGCTAC CGGCGCTGTT GGGTAGCTCA
AAGGCGTACG AGCTCATCTG TACAGGCGCC ACTTTGGATG CCGAGGAAGC GTTGAGGCTT
GGCTTGGTTA GCGATGTGGT GGAACCCTCG ACTCTAATGG ATCGAGCCCG CACGATGGCT
CAAGCTATTG CGCTCAACGC TCCTATTCCG ATTCGCTTGG CGAAACGAGC CGTCCAACAG
CACAATCTCG GAGGGTTGCG CGAAGCCTTG GCCCGCGAGA CTGCTGCCCA GAACGTCTGC
TATGAATCCC AAGATGCTCG CGAAGGATTA CGATCCTTCC TCGAGAAGCG AACTCCGACA
TTCCAAGGGA AATAA
 
Protein sequence
MSLRYGSVLY AVKGSVAIVT LNRPEFRNAL GGTIREDIIE VMAVAEANDS VRAIILTGAG 
SAFCSGGDLN ELYLRAVQGQ TIAEKTEPIR DRTLLAVYEA KKPVIAAVNG PAMGAGMNLA
LAADIRIASK EARFSQAHTM RGMMPDYGGT YLLPALLGSS KAYELICTGA TLDAEEALRL
GLVSDVVEPS TLMDRARTMA QAIALNAPIP IRLAKRAVQQ HNLGGLREAL ARETAAQNVC
YESQDAREGL RSFLEKRTPT FQGK