Gene Rmet_5539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5539 
Symbol 
ID4042400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2285486 
End bp2285911 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID637980957 
Producthypothetical protein 
Protein accessionYP_587667 
Protein GI94314458 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG AAGCATTGAT TGTCGACGGT GAGCGTGCGT ACCCGCCGCG GGAATCCGAA 
TTCACCAAGG AATTCTGGTC GGAGCTAGCA CAGGGCCGCT GGATTACCAC GCAATGCACA
GATTGCGGCA AGGCAACGTT CCCGCCAAAG CTTGTCTGTC CCCATTGCTG GTCAACCCAG
GTGGAATGGA AGGCCTTGGG CGCTACGGGA ACGCTTTACT CGTGGACGCG TATTCACGCT
GCGCCCGCAG TGTTCGCTGC CGAGGCCCCC TACGCATGCG GCATCGTGGA TCTCGATTGT
GGAATTCGGT TGGCATGTCG ACTCGTAGAA GACGACGGCG TGCCTTTGAC GATCGGTCAG
CCAGTCGAAA TGGTGGTTCT GCAGTACAAG GACGGTCCTC TGTTCGCAGC GCGGCCCCGC
AATTAG
 
Protein sequence
MTLEALIVDG ERAYPPRESE FTKEFWSELA QGRWITTQCT DCGKATFPPK LVCPHCWSTQ 
VEWKALGATG TLYSWTRIHA APAVFAAEAP YACGIVDLDC GIRLACRLVE DDGVPLTIGQ
PVEMVVLQYK DGPLFAARPR N